Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:6341034-6431056

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10509 19 6340724 to 6341998 1274 CpG island CpG island 10509
Tssr154622 19 6341121 to 6341247 126 + TSS region transcription start site region 154622
Map4k2 19 6341135 to 6355615 14480 + protein coding gene mitogen-activated protein kinase kinase kinase kinase 2
Tssr154623 19 6341423 to 6341486 63 + TSS region transcription start site region 154623
Tssr154624 19 6341746 to 6341793 47 + TSS region transcription start site region 154624
Tssr154625 19 6342534 to 6342542 8 + TSS region transcription start site region 154625
Tssr154626 19 6342549 to 6342560 11 + TSS region transcription start site region 154626
Tssr154627 19 6342562 to 6342573 11 + TSS region transcription start site region 154627
Tssr154628 19 6343782 to 6343793 11 + TSS region transcription start site region 154628
Tssr154629 19 6346411 to 6346425 14 + TSS region transcription start site region 154629
Mir6989 19 6346480 to 6346544 64 + miRNA gene microRNA 6989
Gm14966 19 6355522 to 6363759 8237 - antisense lncRNA gene predicted gene 14966
Tssr157853 19 6363213 to 6363230 17 - TSS region transcription start site region 157853
Cpgi10510 19 6363256 to 6364823 1567 CpG island CpG island 10510
Tssr157854 19 6363340 to 6363429 89 - TSS region transcription start site region 157854
Tssr154630 19 6363671 to 6363704 33 + TSS region transcription start site region 154630
Sf1 19 6363690 to 6378030 14340 + protein coding gene splicing factor 1
Tssr154631 19 6363726 to 6363737 11 + TSS region transcription start site region 154631
Tssr154632 19 6363896 to 6363941 45 + TSS region transcription start site region 154632
Tssr154633 19 6363946 to 6363960 14 + TSS region transcription start site region 154633
Tssr154634 19 6363989 to 6364042 53 + TSS region transcription start site region 154634
Tssr154635 19 6364578 to 6364668 90 + TSS region transcription start site region 154635
Tssr154636 19 6372582 to 6372598 16 + TSS region transcription start site region 154636
Tssr154637 19 6373641 to 6373660 19 + TSS region transcription start site region 154637
Tssr154638 19 6373670 to 6373718 48 + TSS region transcription start site region 154638
Tssr154639 19 6374771 to 6374791 20 + TSS region transcription start site region 154639
Tssr154640 19 6376012 to 6376017 5 + TSS region transcription start site region 154640
Tssr154641 19 6376538 to 6376558 20 + TSS region transcription start site region 154641
Tssr154642 19 6384395 to 6384422 27 + TSS region transcription start site region 154642
Pygm 19 6384408 to 6398464 14056 + protein coding gene muscle glycogen phosphorylase
Tssr154643 19 6384453 to 6384456 3 + TSS region transcription start site region 154643
Tssr154644 19 6386034 to 6386056 22 + TSS region transcription start site region 154644
Tssr154645 19 6386411 to 6386427 16 + TSS region transcription start site region 154645
Cpgi10511 19 6388113 to 6388343 230 CpG island CpG island 10511
Tssr154646 19 6389540 to 6389555 15 + TSS region transcription start site region 154646
Cpgi10512 19 6389591 to 6390135 544 CpG island CpG island 10512
Tssr154647 19 6389793 to 6389804 11 + TSS region transcription start site region 154647
Tssr154648 19 6393709 to 6393729 20 + TSS region transcription start site region 154648
Tssr5423 19 6393860 to 6393900 40 + TSS region transcription start site region 5423
Tssr154649 19 6396554 to 6396556 2 + TSS region transcription start site region 154649
Tssr154650 19 6397640 to 6397659 19 + TSS region transcription start site region 154650
Tssr154651 19 6398140 to 6398155 15 + TSS region transcription start site region 154651
Cpgi10513 19 6398573 to 6400659 2086 CpG island CpG island 10513
Tssr5424 19 6398737 to 6398764 27 + TSS region transcription start site region 5424
Rasgrp2 19 6399340 to 6415216 15876 + protein coding gene RAS, guanyl releasing protein 2
Tssr154652 19 6399835 to 6399855 20 + TSS region transcription start site region 154652
Tssr154653 19 6399857 to 6399890 33 + TSS region transcription start site region 154653
Tssr154654 19 6400523 to 6400559 36 + TSS region transcription start site region 154654
Tssr154655 19 6400611 to 6400622 11 + TSS region transcription start site region 154655
Cpgi10514 19 6401405 to 6401898 493 CpG island CpG island 10514
Tssr154656 19 6401675 to 6401715 40 + TSS region transcription start site region 154656
Cpgi10515 19 6404675 to 6405112 437 CpG island CpG island 10515
Tssr154657 19 6408399 to 6408410 11 + TSS region transcription start site region 154657
Gm14965 19 6409400 to 6418606 9206 - lncRNA gene predicted gene 14965
Tssr154658 19 6413071 to 6413087 16 + TSS region transcription start site region 154658
Cpgi10516 19 6413076 to 6413318 242 CpG island CpG island 10516
Tssr154659 19 6413105 to 6413130 25 + TSS region transcription start site region 154659
Cpgi10517 19 6418245 to 6419355 1110 CpG island CpG island 10517
Tssr154660 19 6418733 to 6418810 77 + TSS region transcription start site region 154660
Nrxn2 19 6418738 to 6533217 114479 + protein coding gene neurexin II
Cpgi10518 19 6420613 to 6420807 194 CpG island CpG island 10518
Cpgi10519 19 6427613 to 6429221 1608 CpG island CpG island 10519