Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:6007538-6047865

22 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Capn1	19	5988546 to 6015825	27279	-	protein coding gene	calpain 1
Gm10814	19	6012620 to 6018426	5806	+	lincRNA gene	predicted gene 10814
Tssr157811	19	6015152 to 6015198	46	-	TSS region	transcription start site region 157811
Cpgi10490	19	6015291 to 6015954	663		CpG island	CpG island 10490
Tssr157812	19	6015489 to 6015505	16	-	TSS region	transcription start site region 157812
Tssr157813	19	6015514 to 6015528	14	-	TSS region	transcription start site region 157813
Tssr157814	19	6015769 to 6015830	61	-	TSS region	transcription start site region 157814
Tssr157815	19	6015842 to 6015871	29	-	TSS region	transcription start site region 157815
Gm19505	19	6027533 to 6028401	868	-	pseudogene	predicted gene, 19505
Tssr154537	19	6036715 to 6036716	1	+	TSS region	transcription start site region 154537
Gm8034	19	6044691 to 6044822	131	-	pseudogene	predicted gene 8034
Tssr157816	19	6044890 to 6044901	11	-	TSS region	transcription start site region 157816
D530017H19Rik	19	6045059 to 6047018	1959		unclassified non-coding RNA gene	RIKEN cDNA D530017H19 gene
Tssr154538	19	6046104 to 6046113	9	+	TSS region	transcription start site region 154538
Cpgi10491	19	6046214 to 6047733	1519		CpG island	CpG island 10491
Syvn1	19	6046576 to 6053712	7136	+	protein coding gene	synovial apoptosis inhibitor 1, synoviolin
Tssr154539	19	6046629 to 6046645	16	+	TSS region	transcription start site region 154539
Tssr157817	19	6046948 to 6047031	83	-	TSS region	transcription start site region 157817
Tssr154540	19	6047021 to 6047041	20	+	TSS region	transcription start site region 154540
Tssr154541	19	6047055 to 6047080	25	+	TSS region	transcription start site region 154541
Tssr154542	19	6047081 to 6047103	22	+	TSS region	transcription start site region 154542
Tssr157818	19	6047410 to 6047424	14	-	TSS region	transcription start site region 157818