Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 19:47731857-47842454

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18 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi11035 19 47730886 to 47732121 1235 CpG island CpG island 11035
Sfr1 19 47731714 to 47735588 3874 + protein coding gene SWI5 dependent recombination repair 1
Tssr156886 19 47732945 to 47732950 5 + TSS region transcription start site region 156886
Tssr156887 19 47733652 to 47733665 13 + TSS region transcription start site region 156887
Cfap43 19 47736857 to 47837454 100597 - protein coding gene cilia and flagella associated protein 43
Mir8090 19 47755022 to 47755157 135 - miRNA gene microRNA 8090
Cpgi11036 19 47755641 to 47755940 299 CpG island CpG island 11036
Cpgi11037 19 47786755 to 47787115 360 CpG island CpG island 11037
Tssr159755 19 47787107 to 47787129 22 - TSS region transcription start site region 159755
D19Dcr56 19 47788541 to 47788651 110 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 56
Cpgi11038 19 47813125 to 47813310 185 CpG island CpG island 11038
D19Mit83 19 47831148 to 47831274 126 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 83
Tssr156888 19 47834936 to 47834945 9 + TSS region transcription start site region 156888
Tssr159756 19 47835939 to 47835982 43 - TSS region transcription start site region 159756
Cpgi11039 19 47837047 to 47837736 689 CpG island CpG island 11039
Tssr159757 19 47837262 to 47837275 13 - TSS region transcription start site region 159757
Tssr159758 19 47837291 to 47837305 14 - TSS region transcription start site region 159758
Tssr159759 19 47837378 to 47837424 46 - TSS region transcription start site region 159759