Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 19:47716857-47857454

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33 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm50282 19 47721035 to 47723066 2031 + lncRNA gene predicted gene, 50282
D19Dcr55 19 47728013 to 47728108 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 55
Cpgi11035 19 47730886 to 47732121 1235 CpG island CpG island 11035
Sfr1 19 47731714 to 47735588 3874 + protein coding gene SWI5 dependent recombination repair 1
Tssr156884 19 47731743 to 47731768 25 + TSS region transcription start site region 156884
Tssr156885 19 47731774 to 47731797 23 + TSS region transcription start site region 156885
Tssr156886 19 47732945 to 47732950 5 + TSS region transcription start site region 156886
Tssr156887 19 47733652 to 47733665 13 + TSS region transcription start site region 156887
Cfap43 19 47736857 to 47837454 100597 - protein coding gene cilia and flagella associated protein 43
Mir8090 19 47755022 to 47755157 135 - miRNA gene microRNA 8090
Cpgi11036 19 47755641 to 47755940 299 CpG island CpG island 11036
Cpgi11037 19 47786755 to 47787115 360 CpG island CpG island 11037
Tssr159755 19 47787107 to 47787129 22 - TSS region transcription start site region 159755
D19Dcr56 19 47788541 to 47788651 110 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 56
Cpgi11038 19 47813125 to 47813310 185 CpG island CpG island 11038
D19Mit83 19 47831148 to 47831274 126 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 83
Tssr156888 19 47834936 to 47834945 9 + TSS region transcription start site region 156888
Tssr159756 19 47835939 to 47835982 43 - TSS region transcription start site region 159756
Cpgi11039 19 47837047 to 47837736 689 CpG island CpG island 11039
Tssr159757 19 47837262 to 47837275 13 - TSS region transcription start site region 159757
Tssr159758 19 47837291 to 47837305 14 - TSS region transcription start site region 159758
Tssr159759 19 47837378 to 47837424 46 - TSS region transcription start site region 159759
Gm30021 19 47853111 to 47854901 1790 - lncRNA gene predicted gene, 30021
Tssr156889 19 47854103 to 47854115 12 + TSS region transcription start site region 156889
Tssr156890 19 47854246 to 47854274 28 + TSS region transcription start site region 156890
Cpgi11040 19 47854664 to 47855452 788 CpG island CpG island 11040
Tssr159760 19 47854910 to 47854921 11 - TSS region transcription start site region 159760
Gsto1 19 47854973 to 47864790 9817 + protein coding gene glutathione S-transferase omega 1
Tssr156891 19 47854995 to 47855013 18 + TSS region transcription start site region 156891
Tssr156892 19 47855018 to 47855021 3 + TSS region transcription start site region 156892
Tssr156893 19 47855022 to 47855047 25 + TSS region transcription start site region 156893
Tssr156894 19 47855207 to 47855225 18 + TSS region transcription start site region 156894
Tssr159761 19 47855292 to 47855328 36 - TSS region transcription start site region 159761