Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:45788144-46028488

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
sgl 19 45787633 to 45888656 101023 heritable phenotypic marker scraggly
Kcnip2 19 45792346 to 45816432 24086 - protein coding gene Kv channel-interacting protein 2
Cpgi10975 19 45796928 to 45797147 219 CpG island CpG island 10975
Cpgi10976 19 45812148 to 45812371 223 CpG island CpG island 10976
Tssr159578 19 45812293 to 45812307 14 - TSS region transcription start site region 159578
Tssr159579 19 45812380 to 45812389 9 - TSS region transcription start site region 159579
Cpgi10977 19 45815739 to 45815915 176 CpG island CpG island 10977
Tssr159580 19 45816007 to 45816076 69 - TSS region transcription start site region 159580
Tssr159581 19 45816239 to 45816252 13 - TSS region transcription start site region 159581
Tssr159582 19 45816378 to 45816397 19 - TSS region transcription start site region 159582
Armh3 19 45818144 to 45998488 180344 - protein coding gene armadillo-like helical domain containing 3
Tssr159583 19 45840010 to 45840017 7 - TSS region transcription start site region 159583
Cpgi10978 19 45843569 to 45843759 190 CpG island CpG island 10978
D19Ertd132e 19 45857098 to 45857297 199 DNA segment DNA segment, Chr 19, ERATO Doi 132, expressed
D19Dcr88 19 45857428 to 45857524 96 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 88
A102 19 45871337 to 45871580 243 DNA segment DNA segment, A102
Gm6813 19 45877611 to 45878164 553 - pseudogene predicted gene 6813
Tssr159584 19 45878157 to 45878165 8 - TSS region transcription start site region 159584
D19Mit102 19 45888507 to 45888656 149 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 102
Tssr159585 19 45903817 to 45903821 4 - TSS region transcription start site region 159585
A085 19 45914478 to 45914657 179 DNA segment DNA segment, A085
A097 19 45938290 to 45938526 236 DNA segment DNA segment, A097
A105 19 45987142 to 45987347 205 DNA segment DNA segment, A105
Cpgi10979 19 45997859 to 45998806 947 CpG island CpG island 10979
Tssr156701 19 45998131 to 45998142 11 + TSS region transcription start site region 156701
4930505N22Rik 19 45998137 to 46013386 15249 + lincRNA gene RIKEN cDNA 4930505N22 gene
Tssr156702 19 45998143 to 45998153 10 + TSS region transcription start site region 156702
Tssr159586 19 45998222 to 45998229 7 - TSS region transcription start site region 159586
Tssr159587 19 45998449 to 45998478 29 - TSS region transcription start site region 159587
Tssr159588 19 45998479 to 45998521 42 - TSS region transcription start site region 159588
Cpgi10980 19 46003249 to 46004441 1192 CpG island CpG island 10980
Tssr156703 19 46003468 to 46003547 79 + TSS region transcription start site region 156703
Hps6 19 46003478 to 46006173 2695 + protein coding gene HPS6, biogenesis of lysosomal organelles complex 2 subunit 3
A091 19 46028411 to 46028600 189 DNA segment DNA segment, A091