Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:45600780-45751063

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dp(19Lbx1-Fbxw4)3Fsp 19 45232684 to 45660312 427628 chromosomal duplication duplication, Chr 19, Francois Spitz 3
Dp(19Lbx1-Fgf8)2Fsp 19 45232684 to 45742915 510231 chromosomal duplication duplication, Chr 19, Francois Spitz 2
Del(19Poll-Fbxw4)4Fsp 19 45552275 to 45660312 108037 chromosomal deletion deletion, Chr 19, Francois Spitz 4
Del(19Poll-Fgf8)5Fsp 19 45552275 to 45742915 190640 chromosomal deletion deletion, Chr 19, Francois Spitz 5
Fbxw4 19 45578254 to 45660312 82058 - protein coding gene F-box and WD-40 domain protein 4
Tssr159562 19 45631086 to 45631106 20 - TSS region transcription start site region 159562
Tssr159563 19 45631122 to 45631157 35 - TSS region transcription start site region 159563
Cpgi10967 19 45659282 to 45660756 1474 CpG island CpG island 10967
Tssr159564 19 45660460 to 45660493 33 - TSS region transcription start site region 159564
Tssr159565 19 45660496 to 45660520 24 - TSS region transcription start site region 159565
Cpgi10968 19 45675780 to 45676063 283 CpG island CpG island 10968
Tssr159566 19 45683525 to 45683546 21 - TSS region transcription start site region 159566
Cpgi10969 19 45695502 to 45695711 209 CpG island CpG island 10969
A087 19 45725433 to 45725612 179 DNA segment DNA segment, A087
4933429K18Rik 19 45726555 to 45730558 4003 - lncRNA gene RIKEN cDNA 4933429K18 gene
In(19Fgf8-Pitx3)1Fsp 19 45736798 to 46148326 411528 chromosomal inversion inversion, Chr 19, Francois Spitz 1
Fgf8 19 45736798 to 45742915 6117 - protein coding gene fibroblast growth factor 8
Cpgi10970 19 45736873 to 45737403 530 CpG island CpG island 10970
Cpgi10971 19 45741468 to 45743544 2076 CpG island CpG island 10971
Tssr159567 19 45742856 to 45742863 7 - TSS region transcription start site region 159567
Tssr159568 19 45742882 to 45742899 17 - TSS region transcription start site region 159568
Cpgi10972 19 45745629 to 45746573 944 CpG island CpG island 10972
Npm3 19 45747734 to 45749563 1829 - protein coding gene nucleoplasmin 3
Cpgi10973 19 45748657 to 45749732 1075 CpG island CpG island 10973
Tssr156698 19 45749199 to 45749228 29 + TSS region transcription start site region 156698
Tssr159569 19 45749378 to 45749418 40 - TSS region transcription start site region 159569
Gm15491 19 45749508 to 45752310 2802 + antisense lncRNA gene predicted gene 15491
Tssr159570 19 45749563 to 45749576 13 - TSS region transcription start site region 159570
Tssr156699 19 45749608 to 45749631 23 + TSS region transcription start site region 156699
Oga 19 45750261 to 45783520 33259 - protein coding gene O-GlcNAcase