Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:44393472-44614273

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127 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scd1 19 44394451 to 44407709 13258 - protein coding gene stearoyl-Coenzyme A desaturase 1
Tssr159446 19 44394582 to 44394593 11 - TSS region transcription start site region 159446
Tssr159447 19 44394759 to 44394768 9 - TSS region transcription start site region 159447
Tssr159448 19 44394791 to 44394794 3 - TSS region transcription start site region 159448
Tssr159449 19 44394843 to 44394857 14 - TSS region transcription start site region 159449
Tssr159450 19 44394870 to 44394871 1 - TSS region transcription start site region 159450
Tssr159451 19 44394942 to 44394951 9 - TSS region transcription start site region 159451
Tssr159452 19 44395232 to 44395245 13 - TSS region transcription start site region 159452
Tssr159453 19 44395291 to 44395314 23 - TSS region transcription start site region 159453
Tssr159454 19 44395323 to 44395333 10 - TSS region transcription start site region 159454
Tssr159455 19 44395616 to 44395639 23 - TSS region transcription start site region 159455
Tssr159456 19 44395738 to 44395758 20 - TSS region transcription start site region 159456
Tssr159457 19 44395782 to 44395787 5 - TSS region transcription start site region 159457
Tssr159458 19 44395812 to 44395821 9 - TSS region transcription start site region 159458
Tssr159459 19 44395902 to 44395913 11 - TSS region transcription start site region 159459
Tssr159460 19 44395939 to 44395949 10 - TSS region transcription start site region 159460
Tssr159461 19 44395998 to 44396010 12 - TSS region transcription start site region 159461
Tssr159462 19 44396026 to 44396042 16 - TSS region transcription start site region 159462
Tssr159463 19 44396072 to 44396081 9 - TSS region transcription start site region 159463
Tssr159464 19 44396095 to 44396111 16 - TSS region transcription start site region 159464
Tssr159465 19 44396119 to 44396131 12 - TSS region transcription start site region 159465
Tssr159466 19 44396140 to 44396149 9 - TSS region transcription start site region 159466
Tssr159467 19 44396193 to 44396213 20 - TSS region transcription start site region 159467
Tssr5524 19 44396359 to 44396364 5 - TSS region transcription start site region 5524
Tssr156606 19 44396408 to 44396426 18 + TSS region transcription start site region 156606
Tssr159468 19 44396441 to 44396459 18 - TSS region transcription start site region 159468
Tssr159469 19 44396511 to 44396524 13 - TSS region transcription start site region 159469
Tssr159470 19 44396528 to 44396538 10 - TSS region transcription start site region 159470
Tssr159471 19 44396545 to 44396571 26 - TSS region transcription start site region 159471
Tssr159472 19 44396581 to 44396597 16 - TSS region transcription start site region 159472
Tssr159473 19 44396600 to 44396616 16 - TSS region transcription start site region 159473
Tssr159474 19 44396625 to 44396638 13 - TSS region transcription start site region 159474
Tssr159475 19 44396670 to 44396685 15 - TSS region transcription start site region 159475
Tssr159476 19 44396688 to 44396703 15 - TSS region transcription start site region 159476
Tssr159477 19 44396708 to 44396712 4 - TSS region transcription start site region 159477
Tssr159478 19 44396718 to 44396733 15 - TSS region transcription start site region 159478
Tssr156607 19 44396732 to 44396747 15 + TSS region transcription start site region 156607
Tssr159479 19 44396742 to 44396751 9 - TSS region transcription start site region 159479
Tssr159480 19 44396770 to 44396783 13 - TSS region transcription start site region 159480
Tssr159481 19 44396819 to 44396842 23 - TSS region transcription start site region 159481
Tssr159482 19 44396919 to 44396930 11 - TSS region transcription start site region 159482
D19Mit67.2 19 44397005 to 44397170 165 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 67.2
Tssr159483 19 44397010 to 44397028 18 - TSS region transcription start site region 159483
Tssr159484 19 44397044 to 44397055 11 - TSS region transcription start site region 159484
D19Nds1 19 44397113 to 44397283 170 DNA segment DNA segment, Chr 19, Nuffield Department of Surgery 1
Tssr156608 19 44397141 to 44397162 21 + TSS region transcription start site region 156608
D19Mit67 19 44397155 to 44397266 111 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 67
Renmq1 19 44397155 to 44397266 111 QTL renal mercury accumulation QTL 1
Tssr159485 19 44397170 to 44397173 3 - TSS region transcription start site region 159485
Tssr159486 19 44397177 to 44397187 10 - TSS region transcription start site region 159486
Tssr159487 19 44397258 to 44397269 11 - TSS region transcription start site region 159487
Tssr159488 19 44397275 to 44397312 37 - TSS region transcription start site region 159488
Tssr159489 19 44397329 to 44397372 43 - TSS region transcription start site region 159489
Tssr156609 19 44397351 to 44397358 7 + TSS region transcription start site region 156609
Tssr159490 19 44397431 to 44397438 7 - TSS region transcription start site region 159490
Tssr159491 19 44397466 to 44397487 21 - TSS region transcription start site region 159491
Tssr159492 19 44397517 to 44397530 13 - TSS region transcription start site region 159492
Tssr159493 19 44397543 to 44397554 11 - TSS region transcription start site region 159493
Tssr159494 19 44397563 to 44397592 29 - TSS region transcription start site region 159494
Tssr159495 19 44397681 to 44397741 60 - TSS region transcription start site region 159495
Tssr159496 19 44397751 to 44397761 10 - TSS region transcription start site region 159496
Tssr159497 19 44397764 to 44397771 7 - TSS region transcription start site region 159497
Tssr159498 19 44397776 to 44397782 6 - TSS region transcription start site region 159498
Tssr159499 19 44397806 to 44397834 28 - TSS region transcription start site region 159499
Tssr159500 19 44397837 to 44397848 11 - TSS region transcription start site region 159500
Tssr159501 19 44397852 to 44397884 32 - TSS region transcription start site region 159501
Tssr159502 19 44397888 to 44397895 7 - TSS region transcription start site region 159502
Tssr159503 19 44397901 to 44397947 46 - TSS region transcription start site region 159503
Tssr159504 19 44397980 to 44398012 32 - TSS region transcription start site region 159504
Tssr159505 19 44398093 to 44398118 25 - TSS region transcription start site region 159505
Tssr159506 19 44400165 to 44400182 17 - TSS region transcription start site region 159506
Tssr159507 19 44400186 to 44400235 49 - TSS region transcription start site region 159507
Tssr159508 19 44400272 to 44400308 36 - TSS region transcription start site region 159508
Tssr156610 19 44401867 to 44401882 15 + TSS region transcription start site region 156610
Tssr159509 19 44403228 to 44403238 10 - TSS region transcription start site region 159509
Tssr159510 19 44403241 to 44403259 18 - TSS region transcription start site region 159510
Tssr156611 19 44403254 to 44403260 6 + TSS region transcription start site region 156611
Tssr159511 19 44403277 to 44403299 22 - TSS region transcription start site region 159511
Tssr159512 19 44403582 to 44403595 13 - TSS region transcription start site region 159512
Tssr159513 19 44406530 to 44406582 52 - TSS region transcription start site region 159513
Tssr156612 19 44406602 to 44406632 30 + TSS region transcription start site region 156612
Tssr159514 19 44406625 to 44406630 5 - TSS region transcription start site region 159514
Tssr159515 19 44406631 to 44406652 21 - TSS region transcription start site region 159515
Tssr156613 19 44406683 to 44406731 48 + TSS region transcription start site region 156613
Tssr159516 19 44406718 to 44406768 50 - TSS region transcription start site region 159516
Cpgi10894 19 44407277 to 44407651 374 CpG island CpG island 10894
Tssr5525 19 44407418 to 44407475 57 - TSS region transcription start site region 5525
Tssr159517 19 44407489 to 44407498 9 - TSS region transcription start site region 159517
Tssr5526 19 44407505 to 44407508 3 - TSS region transcription start site region 5526
Tssr5527 19 44407515 to 44407518 3 - TSS region transcription start site region 5527
Tssr5528 19 44407544 to 44407548 4 - TSS region transcription start site region 5528
Tssr159518 19 44407553 to 44407569 16 - TSS region transcription start site region 159518
Tssr5529 19 44407582 to 44407599 17 - TSS region transcription start site region 5529
Tssr159519 19 44407610 to 44407623 13 - TSS region transcription start site region 159519
Tssr159520 19 44407659 to 44407668 9 - TSS region transcription start site region 159520
D19Mit1000 19 44407680 to 44407829 149 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 1000
Tssr159521 19 44407703 to 44407712 9 - TSS region transcription start site region 159521
Tssr159522 19 44407809 to 44407822 13 - TSS region transcription start site region 159522
Tssr159523 19 44407831 to 44407877 46 - TSS region transcription start site region 159523
Tssr159524 19 44407883 to 44407901 18 - TSS region transcription start site region 159524
Tssr156614 19 44408020 to 44408038 18 + TSS region transcription start site region 156614
Tssr159525 19 44408734 to 44408757 23 - TSS region transcription start site region 159525
Tssr159526 19 44408764 to 44408776 12 - TSS region transcription start site region 159526
Tssr159527 19 44410457 to 44410466 9 - TSS region transcription start site region 159527
Tssr159528 19 44410475 to 44410491 16 - TSS region transcription start site region 159528
Tssr159529 19 44446252 to 44446259 7 - TSS region transcription start site region 159529
Gm35406 19 44453633 to 44458483 4850 + lncRNA gene predicted gene, 35406
Tssr156615 19 44493467 to 44493500 33 + TSS region transcription start site region 156615
Wnt8b 19 44493472 to 44514273 20801 + protein coding gene wingless-type MMTV integration site family, member 8B
Cpgi10895 19 44511185 to 44512493 1308 CpG island CpG island 10895
Tssr156616 19 44511197 to 44511208 11 + TSS region transcription start site region 156616
Tssr156617 19 44511232 to 44511242 10 + TSS region transcription start site region 156617
Sec31b 19 44516957 to 44545848 28891 - protein coding gene Sec31 homolog B (S. cerevisiae)
Gm20538 19 44543722 to 44552831 9109 - protein coding gene predicted gene 20538
Cpgi10896 19 44545366 to 44546050 684 CpG island CpG island 10896
Tssr159530 19 44545809 to 44545832 23 - TSS region transcription start site region 159530
Tssr159531 19 44545836 to 44545871 35 - TSS region transcription start site region 159531
Ndufb8 19 44548983 to 44555442 6459 - protein coding gene NADH:ubiquinone oxidoreductase subunit B8
Cpgi10897 19 44554793 to 44555633 840 CpG island CpG island 10897
Tssr156618 19 44554955 to 44554957 2 + TSS region transcription start site region 156618
Tssr159532 19 44555398 to 44555437 39 - TSS region transcription start site region 159532
Cpgi10898 19 44562678 to 44563044 366 CpG island CpG island 10898
Tssr156619 19 44562841 to 44562879 38 + TSS region transcription start site region 156619
Hif1an 19 44562854 to 44576274 13420 + protein coding gene hypoxia-inducible factor 1, alpha subunit inhibitor
Tssr156620 19 44565064 to 44565068 4 + TSS region transcription start site region 156620
D19Dcr86 19 44584925 to 44585024 99 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 86
Cpgi10899 19 44591026 to 44591206 180 CpG island CpG island 10899