Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:44090550-44340566

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84 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Chuk 19 44073335 to 44107480 34145 - protein coding gene conserved helix-loop-helix ubiquitous kinase
Cpgi10884 19 44106876 to 44107632 756 CpG island CpG island 10884
Tssr159433 19 44107426 to 44107441 15 - TSS region transcription start site region 159433
Tssr159434 19 44107447 to 44107492 45 - TSS region transcription start site region 159434
Tssr156551 19 44107521 to 44107588 67 + TSS region transcription start site region 156551
Cwf19l1 19 44108644 to 44135876 27232 - protein coding gene CWF19-like 1, cell cycle control (S. pombe)
Gm24336 19 44113979 to 44114124 145 - snoRNA gene predicted gene, 24336
Cpgi10885 19 44135223 to 44135950 727 CpG island CpG island 10885
Tssr159435 19 44135816 to 44135881 65 - TSS region transcription start site region 159435
Bloc1s2 19 44139266 to 44146446 7180 - protein coding gene biogenesis of lysosomal organelles complex-1, subunit 2
Cpgi10886 19 44146050 to 44146655 605 CpG island CpG island 10886
Tssr159436 19 44146433 to 44146447 14 - TSS region transcription start site region 159436
Pkd2l1 19 44147637 to 44192442 44805 - protein coding gene polycystic kidney disease 2-like 1
Tssr156552 19 44203213 to 44203229 16 + TSS region transcription start site region 156552
D19Dcr85 19 44203215 to 44203311 96 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 85
Tssr156553 19 44203265 to 44203284 19 + TSS region transcription start site region 156553
Scd3 19 44203288 to 44244016 40728 + protein coding gene stearoyl-coenzyme A desaturase 3
Tssr159437 19 44215550 to 44215566 16 - TSS region transcription start site region 159437
Tssr156554 19 44229629 to 44229632 3 + TSS region transcription start site region 156554
Tssr159438 19 44231664 to 44231697 33 - TSS region transcription start site region 159438
Tssr156555 19 44236993 to 44237020 27 + TSS region transcription start site region 156555
Tssr156556 19 44237716 to 44237741 25 + TSS region transcription start site region 156556
Cpgi10887 19 44238339 to 44238678 339 CpG island CpG island 10887
Tssr156557 19 44241893 to 44241908 15 + TSS region transcription start site region 156557
Tssr156558 19 44242053 to 44242070 17 + TSS region transcription start site region 156558
Tssr156559 19 44242254 to 44242262 8 + TSS region transcription start site region 156559
Tssr156560 19 44242309 to 44242337 28 + TSS region transcription start site region 156560
Tssr156561 19 44243678 to 44243709 31 + TSS region transcription start site region 156561
Tssr159439 19 44246560 to 44246587 27 - TSS region transcription start site region 159439
Cpgi10888 19 44247577 to 44248498 921 CpG island CpG island 10888
Tssr159440 19 44248126 to 44248173 47 - TSS region transcription start site region 159440
Gm6951 19 44252622 to 44261446 8824 + pseudogene predicted gene 6951
Cpgi10889 19 44266818 to 44267568 750 CpG island CpG island 10889
Gm35183 19 44272137 to 44278225 6088 + lncRNA gene predicted gene, 35183
Tssr159441 19 44280789 to 44280806 17 - TSS region transcription start site region 159441
Tssr156562 19 44280964 to 44280970 6 + TSS region transcription start site region 156562
Tssr156563 19 44281039 to 44281051 12 + TSS region transcription start site region 156563
Gm41853 19 44282343 to 44283697 1354 + lncRNA gene predicted gene, 41853
Cpgi10890 19 44284080 to 44284776 696 CpG island CpG island 10890
Scd2 19 44293676 to 44306864 13188 + protein coding gene stearoyl-Coenzyme A desaturase 2
Cpgi10891 19 44293970 to 44294399 429 CpG island CpG island 10891
Tssr5523 19 44294003 to 44294041 38 + TSS region transcription start site region 5523
Tssr156564 19 44294073 to 44294099 26 + TSS region transcription start site region 156564
Tssr156565 19 44294142 to 44294149 7 + TSS region transcription start site region 156565
Tssr156566 19 44294158 to 44294168 10 + TSS region transcription start site region 156566
Tssr156567 19 44294193 to 44294206 13 + TSS region transcription start site region 156567
Tssr156568 19 44294232 to 44294246 14 + TSS region transcription start site region 156568
Tssr156569 19 44294256 to 44294259 3 + TSS region transcription start site region 156569
Tssr156570 19 44294265 to 44294273 8 + TSS region transcription start site region 156570
Tssr156571 19 44294296 to 44294304 8 + TSS region transcription start site region 156571
Tssr159442 19 44294799 to 44294805 6 - TSS region transcription start site region 159442
Tssr156572 19 44294902 to 44294919 17 + TSS region transcription start site region 156572
Tssr156573 19 44294920 to 44294938 18 + TSS region transcription start site region 156573
Tssr159443 19 44294954 to 44294972 18 - TSS region transcription start site region 159443
Tssr156574 19 44294966 to 44294980 14 + TSS region transcription start site region 156574
Tssr156575 19 44294997 to 44295018 21 + TSS region transcription start site region 156575
Tssr156576 19 44295026 to 44295044 18 + TSS region transcription start site region 156576
Tssr156577 19 44295087 to 44295127 40 + TSS region transcription start site region 156577
Tssr156578 19 44296632 to 44296653 21 + TSS region transcription start site region 156578
Tssr156579 19 44296839 to 44296860 21 + TSS region transcription start site region 156579
Tssr156580 19 44298060 to 44298127 67 + TSS region transcription start site region 156580
Tssr156581 19 44301277 to 44301297 20 + TSS region transcription start site region 156581
Tssr156582 19 44301351 to 44301398 47 + TSS region transcription start site region 156582
Tssr156583 19 44302996 to 44303012 16 + TSS region transcription start site region 156583
Mir5114 19 44303171 to 44303231 60 + miRNA gene microRNA 5114
Tssr156584 19 44303201 to 44303218 17 + TSS region transcription start site region 156584
Tssr156585 19 44303239 to 44303255 16 + TSS region transcription start site region 156585
Tssr156586 19 44303301 to 44303310 9 + TSS region transcription start site region 156586
Tssr156587 19 44303336 to 44303346 10 + TSS region transcription start site region 156587
Tssr156588 19 44303347 to 44303412 65 + TSS region transcription start site region 156588
Tssr156589 19 44303444 to 44303455 11 + TSS region transcription start site region 156589
Tssr156590 19 44303468 to 44303477 9 + TSS region transcription start site region 156590
Tssr156591 19 44303538 to 44303560 22 + TSS region transcription start site region 156591
Tssr156592 19 44303813 to 44303833 20 + TSS region transcription start site region 156592
Tssr156593 19 44304597 to 44304617 20 + TSS region transcription start site region 156593
Tssr156594 19 44305919 to 44305946 27 + TSS region transcription start site region 156594
Cpgi10892 19 44314563 to 44314728 165 CpG island CpG island 10892
Tssr156595 19 44333318 to 44333333 15 + TSS region transcription start site region 156595
Scd4 19 44333326 to 44346743 13417 + protein coding gene stearoyl-coenzyme A desaturase 4
Tssr156596 19 44333341 to 44333358 17 + TSS region transcription start site region 156596
Tssr156597 19 44333367 to 44333380 13 + TSS region transcription start site region 156597
Tssr156598 19 44333402 to 44333411 9 + TSS region transcription start site region 156598
Tssr156599 19 44333422 to 44333427 5 + TSS region transcription start site region 156599
Tssr156600 19 44333854 to 44333866 12 + TSS region transcription start site region 156600