Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:43598397-43978427

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89 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10866 19 43599688 to 43600108 420 CpG island CpG island 10866
Cpgi10867 19 43601000 to 43601869 869 CpG island CpG island 10867
Cpgi10868 19 43606687 to 43607255 568 CpG island CpG island 10868
Gm20467 19 43609077 to 43610625 1548 - lincRNA gene predicted gene 20467
Cpgi10869 19 43610246 to 43610904 658 CpG island CpG island 10869
Gm46656 19 43610832 to 43611890 1058 - lncRNA gene predicted gene, 46656
Cpgi10870 19 43612018 to 43612945 927 CpG island CpG island 10870
Tssr156516 19 43612299 to 43612321 22 + TSS region transcription start site region 156516
Nkx2-3 19 43612325 to 43615892 3567 + protein coding gene NK2 homeobox 3
Tssr156517 19 43612392 to 43612416 24 + TSS region transcription start site region 156517
Cpgi10871 19 43613954 to 43615399 1445 CpG island CpG island 10871
Cpgi10872 19 43615918 to 43616920 1002 CpG island CpG island 10872
Cpgi10873 19 43617045 to 43617197 152 CpG island CpG island 10873
Cpgi10874 19 43619977 to 43620370 393 CpG island CpG island 10874
Gm22646 19 43622446 to 43622560 114 + miRNA gene predicted gene, 22646
Gm4311 19 43637372 to 43642404 5032 - unclassified gene predicted gene 4311
Gm34922 19 43645554 to 43655630 10076 + lncRNA gene predicted gene, 34922
Tssr156518 19 43647480 to 43647485 5 + TSS region transcription start site region 156518
Slc25a28 19 43663822 to 43674881 11059 - protein coding gene solute carrier family 25, member 28
Cpgi10875 19 43674109 to 43676161 2052 CpG island CpG island 10875
Tssr159386 19 43674844 to 43674909 65 - TSS region transcription start site region 159386
Tssr156519 19 43675173 to 43675192 19 + TSS region transcription start site region 156519
BC037704 19 43675178 to 43677170 1992 + lncRNA gene cDNA sequence BC037704
Tssr156520 19 43675460 to 43675482 22 + TSS region transcription start site region 156520
Cpgi10876 19 43689388 to 43690276 888 CpG island CpG island 10876
Tssr156521 19 43689647 to 43689658 11 + TSS region transcription start site region 156521
Tssr156522 19 43689672 to 43689695 23 + TSS region transcription start site region 156522
Entpd7 19 43689672 to 43733697 44025 + protein coding gene ectonucleoside triphosphate diphosphohydrolase 7
Tssr156523 19 43689798 to 43689868 70 + TSS region transcription start site region 156523
Tssr156524 19 43711417 to 43711460 43 + TSS region transcription start site region 156524
Tssr159387 19 43717635 to 43717641 6 - TSS region transcription start site region 159387
Cpgi10877 19 43729715 to 43730028 313 CpG island CpG island 10877
Tssr156525 19 43731171 to 43731175 4 + TSS region transcription start site region 156525
Tssr156526 19 43731441 to 43731461 20 + TSS region transcription start site region 156526
Tssr156527 19 43731778 to 43731799 21 + TSS region transcription start site region 156527
Tssr156528 19 43731997 to 43732001 4 + TSS region transcription start site region 156528
Tssr156529 19 43732260 to 43732264 4 + TSS region transcription start site region 156529
Cox15 19 43733254 to 43753000 19746 - protein coding gene cytochrome c oxidase assembly protein 15
Tssr159388 19 43735941 to 43735944 3 - TSS region transcription start site region 159388
Tssr159389 19 43740535 to 43740539 4 - TSS region transcription start site region 159389
Tssr159390 19 43751662 to 43751681 19 - TSS region transcription start site region 159390
Tssr159391 19 43751706 to 43751708 2 - TSS region transcription start site region 159391
Cpgi10878 19 43752655 to 43753570 915 CpG island CpG island 10878
Tssr159392 19 43752891 to 43752902 11 - TSS region transcription start site region 159392
Tssr159393 19 43752924 to 43753001 77 - TSS region transcription start site region 159393
Tssr156530 19 43752992 to 43753064 72 + TSS region transcription start site region 156530
Cutc 19 43753023 to 43768638 15615 + protein coding gene cutC copper transporter
Tssr156531 19 43753074 to 43753110 36 + TSS region transcription start site region 156531
Tssr156532 19 43753112 to 43753131 19 + TSS region transcription start site region 156532
Tssr156533 19 43782181 to 43782193 12 + TSS region transcription start site region 156533
Tssr156534 19 43782297 to 43782313 16 + TSS region transcription start site region 156534
Abcc2 19 43782308 to 43838332 56024 + protein coding gene ATP-binding cassette, sub-family C (CFTR/MRP), member 2
Tssr156535 19 43782320 to 43782334 14 + TSS region transcription start site region 156535
Tssr156536 19 43782339 to 43782350 11 + TSS region transcription start site region 156536
Tssr156537 19 43782617 to 43782625 8 + TSS region transcription start site region 156537
Tssr156538 19 43783041 to 43783051 10 + TSS region transcription start site region 156538
Tssr156539 19 43786950 to 43786964 14 + TSS region transcription start site region 156539
Tssr156540 19 43786971 to 43786981 10 + TSS region transcription start site region 156540
Tssr156541 19 43787138 to 43787177 39 + TSS region transcription start site region 156541
Tssr156542 19 43788105 to 43788116 11 + TSS region transcription start site region 156542
Tssr156543 19 43788397 to 43788427 30 + TSS region transcription start site region 156543
Tssr156544 19 43792383 to 43792398 15 + TSS region transcription start site region 156544
Tssr156545 19 43794451 to 43794455 4 + TSS region transcription start site region 156545
Tssr156546 19 43808764 to 43808779 15 + TSS region transcription start site region 156546
Gm10768 19 43838803 to 43840845 2042 + lncRNA gene predicted gene 10768
Tssr156547 19 43839264 to 43839275 11 + TSS region transcription start site region 156547
Tssr156548 19 43840030 to 43840039 9 + TSS region transcription start site region 156548
Dnmbp 19 43846821 to 43940191 93370 - protein coding gene dynamin binding protein
Gm24400 19 43857245 to 43857351 106 - snRNA gene predicted gene, 24400
Cpgi10879 19 43879424 to 43879943 519 CpG island CpG island 10879
Tssr159394 19 43879711 to 43879729 18 - TSS region transcription start site region 159394
Tssr159395 19 43879772 to 43879802 30 - TSS region transcription start site region 159395
Tssr159396 19 43890555 to 43890566 11 - TSS region transcription start site region 159396
Tssr159397 19 43890575 to 43890586 11 - TSS region transcription start site region 159397
Tssr159398 19 43890592 to 43890610 18 - TSS region transcription start site region 159398
Tssr156549 19 43921066 to 43921077 11 + TSS region transcription start site region 156549
Tssr159399 19 43921410 to 43921419 9 - TSS region transcription start site region 159399
n-R5s21 19 43932316 to 43932432 116 + rRNA gene nuclear encoded rRNA 5S 21
Cpgi10880 19 43939547 to 43940788 1241 CpG island CpG island 10880
Tssr156550 19 43939756 to 43939759 3 + TSS region transcription start site region 156550
1700084K02Rik 19 43939793 to 43940919 1126 unclassified gene RIKEN cDNA 1700084K02 gene
Tssr159400 19 43940146 to 43940165 19 - TSS region transcription start site region 159400
Tssr159401 19 43940168 to 43940199 31 - TSS region transcription start site region 159401
Tssr159402 19 43940203 to 43940232 29 - TSS region transcription start site region 159402
D19Dcr33 19 43947972 to 43948070 98 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 33
Cpn1 19 43956307 to 43986551 30244 - protein coding gene carboxypeptidase N, polypeptide 1
Tssr159403 19 43968491 to 43968509 18 - TSS region transcription start site region 159403
Tssr159404 19 43968543 to 43968563 20 - TSS region transcription start site region 159404
Tssr159405 19 43968669 to 43968698 29 - TSS region transcription start site region 159405