Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:41887980-41968314

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rrp12 19 41862852 to 41896153 33301 - protein coding gene ribosomal RNA processing 12 homolog (S. cerevisiae)
Cpgi10837 19 41895622 to 41896610 988 CpG island CpG island 10837
Tssr159326 19 41896132 to 41896155 23 - TSS region transcription start site region 159326
Tssr159327 19 41896160 to 41896207 47 - TSS region transcription start site region 159327
Tssr156438 19 41896291 to 41896312 21 + TSS region transcription start site region 156438
Tssr5515 19 41900806 to 41900809 3 - TSS region transcription start site region 5515
Gm46644 19 41900999 to 41903231 2232 + pseudogene predicted gene, 46644
Cpgi10838 19 41911540 to 41912716 1176 CpG island CpG island 10838
Tssr156439 19 41911697 to 41911705 8 + TSS region transcription start site region 156439
Tssr159328 19 41911751 to 41911779 28 - TSS region transcription start site region 159328
Tssr159329 19 41911811 to 41911820 9 - TSS region transcription start site region 159329
Tssr156440 19 41911851 to 41911874 23 + TSS region transcription start site region 156440
Pgam1 19 41911871 to 41918664 6793 + protein coding gene phosphoglycerate mutase 1
Tssr156441 19 41911875 to 41911895 20 + TSS region transcription start site region 156441
Tssr156442 19 41911896 to 41911908 12 + TSS region transcription start site region 156442
Tssr156443 19 41911920 to 41911934 14 + TSS region transcription start site region 156443
Tssr156444 19 41911945 to 41911966 21 + TSS region transcription start site region 156444
Tssr156445 19 41912011 to 41912036 25 + TSS region transcription start site region 156445
Tssr159330 19 41916908 to 41916909 1 - TSS region transcription start site region 159330
Tssr159331 19 41917024 to 41917030 6 - TSS region transcription start site region 159331
Tssr156446 19 41917157 to 41917161 4 + TSS region transcription start site region 156446
Tssr156447 19 41917773 to 41917805 32 + TSS region transcription start site region 156447
B130024M06Rik 19 41919649 to 41922417 2768 unclassified non-coding RNA gene RIKEN cDNA B130024M06 gene
Exosc1 19 41922980 to 41933314 10334 - protein coding gene exosome component 1
Cpgi10839 19 41932603 to 41933863 1260 CpG island CpG island 10839
Tssr156448 19 41932827 to 41932844 17 + TSS region transcription start site region 156448
Tssr159332 19 41933276 to 41933319 43 - TSS region transcription start site region 159332
Tssr156449 19 41933464 to 41933540 76 + TSS region transcription start site region 156449
Zdhhc16 19 41933480 to 41944104 10624 + protein coding gene zinc finger, DHHC domain containing 16
Tssr156450 19 41933908 to 41933912 4 + TSS region transcription start site region 156450
Mms19 19 41943707 to 41981165 37458 - protein coding gene MMS19 cytosolic iron-sulfur assembly component
Tssr159333 19 41964601 to 41964604 3 - TSS region transcription start site region 159333
Tssr159334 19 41966658 to 41966661 3 - TSS region transcription start site region 159334