Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:37391326-38261529

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124 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kif11 19 37376403 to 37421859 45456 + protein coding gene kinesin family member 11
Tssr156217 19 37408725 to 37408741 16 + TSS region transcription start site region 156217
Gm46649 19 37413424 to 37413878 454 - pseudogene predicted gene, 46649
Tssr159087 19 37413875 to 37413886 11 - TSS region transcription start site region 159087
Gm38345 19 37432909 to 37434656 1747 - unclassified gene predicted gene, 38345
Cpgi10792 19 37433967 to 37435739 1772 CpG island CpG island 10792
Tssr5494 19 37434750 to 37434824 74 + TSS region transcription start site region 5494
Tssr156218 19 37434834 to 37434847 13 + TSS region transcription start site region 156218
Hhex 19 37434841 to 37440731 5890 + protein coding gene hematopoietically expressed homeobox
Tssr156219 19 37436621 to 37436625 4 + TSS region transcription start site region 156219
Tssr156220 19 37436707 to 37436716 9 + TSS region transcription start site region 156220
Tssr156221 19 37436732 to 37436748 16 + TSS region transcription start site region 156221
Tssr156222 19 37439772 to 37439789 17 + TSS region transcription start site region 156222
Gm23026 19 37463746 to 37463851 105 + snRNA gene predicted gene, 23026
Tssr156223 19 37465248 to 37465265 17 + TSS region transcription start site region 156223
1700122C19Rik 19 37465254 to 37471827 6573 + lncRNA gene RIKEN cDNA 1700122C19 gene
4933421H12Rik 19 37465260 to 37466955 1695 unclassified gene RIKEN cDNA 4933421H12 gene
Gm32294 19 37493599 to 37495964 2365 + lncRNA gene predicted gene, 32294
Tssr156224 19 37495515 to 37495519 4 + TSS region transcription start site region 156224
D19Dcr27 19 37502475 to 37502570 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 27
Tssr156225 19 37536609 to 37536635 26 + TSS region transcription start site region 156225
Tssr156226 19 37536636 to 37536657 21 + TSS region transcription start site region 156226
Tssr156227 19 37536797 to 37536822 25 + TSS region transcription start site region 156227
Tssr156228 19 37536995 to 37536998 3 + TSS region transcription start site region 156228
Gm41842 19 37545104 to 37546314 1210 - lncRNA gene predicted gene, 41842
Tssr156229 19 37547373 to 37547394 21 + TSS region transcription start site region 156229
Cpgi10793 19 37550035 to 37551135 1100 CpG island CpG island 10793
Tssr156230 19 37550397 to 37550468 71 + TSS region transcription start site region 156230
Exoc6 19 37550418 to 37683245 132827 + protein coding gene exocyst complex component 6
Tssr156231 19 37556718 to 37556719 1 + TSS region transcription start site region 156231
Tssr5495 19 37561573 to 37561579 6 - TSS region transcription start site region 5495
Tssr156232 19 37576970 to 37577002 32 + TSS region transcription start site region 156232
Tssr156233 19 37602537 to 37602541 4 + TSS region transcription start site region 156233
D19Dcr28 19 37631720 to 37631817 97 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 28
D19Mit101 19 37659224 to 37659346 122 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 101
Gm32342 19 37677387 to 37697564 20177 - lncRNA gene predicted gene, 32342
Cyp26c1 19 37685581 to 37693398 7817 + protein coding gene cytochrome P450, family 26, subfamily c, polypeptide 1
Cpgi10794 19 37686365 to 37687841 1476 CpG island CpG island 10794
Cpgi10795 19 37690776 to 37691147 371 CpG island CpG island 10795
Cpgi10796 19 37692840 to 37693515 675 CpG island CpG island 10796
Tssr159088 19 37693078 to 37693121 43 - TSS region transcription start site region 159088
Cpgi10797 19 37697202 to 37699508 2306 CpG island CpG island 10797
Tssr159089 19 37697612 to 37697630 18 - TSS region transcription start site region 159089
Tssr159090 19 37697673 to 37697694 21 - TSS region transcription start site region 159090
Tssr159091 19 37697698 to 37697714 16 - TSS region transcription start site region 159091
Tssr156234 19 37697792 to 37697805 13 + TSS region transcription start site region 156234
Cyp26a1 19 37697808 to 37701528 3720 + protein coding gene cytochrome P450, family 26, subfamily a, polypeptide 1
Tssr156235 19 37697863 to 37697870 7 + TSS region transcription start site region 156235
Gm9066 19 37722761 to 37723516 755 - pseudogene predicted gene 9066
Tssr156236 19 37784209 to 37784259 50 + TSS region transcription start site region 156236
Gm9067 19 37784259 to 37785765 1506 + pseudogene predicted gene 9067
Cpgi10798 19 37826326 to 37826529 203 CpG island CpG island 10798
Gm4757 19 37870267 to 37872256 1989 + pseudogene predicted gene 4757
Myof 19 37899036 to 38043577 144541 - protein coding gene myoferlin
Tssr159092 19 37930976 to 37930990 14 - TSS region transcription start site region 159092
Tssr159093 19 37955910 to 37955941 31 - TSS region transcription start site region 159093
Tssr159094 19 37957401 to 37957425 24 - TSS region transcription start site region 159094
Tssr159095 19 37959759 to 37959777 18 - TSS region transcription start site region 159095
Tssr156237 19 37985609 to 37985612 3 + TSS region transcription start site region 156237
Tssr159096 19 37989534 to 37989545 11 - TSS region transcription start site region 159096
Tssr159097 19 37989696 to 37989727 31 - TSS region transcription start site region 159097
Tssr156238 19 38016461 to 38016494 33 + TSS region transcription start site region 156238
Tssr159098 19 38022614 to 38022627 13 - TSS region transcription start site region 159098
Tssr159099 19 38022734 to 38022752 18 - TSS region transcription start site region 159099
Tssr159100 19 38022764 to 38022777 13 - TSS region transcription start site region 159100
Tssr159101 19 38022792 to 38022813 21 - TSS region transcription start site region 159101
Tssr159102 19 38024330 to 38024346 16 - TSS region transcription start site region 159102
Tssr159103 19 38025817 to 38025830 13 - TSS region transcription start site region 159103
Tssr156239 19 38030241 to 38030250 9 + TSS region transcription start site region 156239
Tssr159104 19 38030647 to 38030651 4 - TSS region transcription start site region 159104
Tssr159105 19 38032912 to 38032918 6 - TSS region transcription start site region 159105
Tssr5496 19 38040688 to 38040719 31 - TSS region transcription start site region 5496
Tssr159106 19 38043324 to 38043384 60 - TSS region transcription start site region 159106
Tssr159107 19 38043385 to 38043418 33 - TSS region transcription start site region 159107
Tssr159108 19 38043559 to 38043600 41 - TSS region transcription start site region 159108
Tssr159109 19 38043635 to 38043646 11 - TSS region transcription start site region 159109
Tssr159110 19 38043760 to 38043801 41 - TSS region transcription start site region 159110
I830134H01Rik 19 38051774 to 38054528 2754 - lincRNA gene RIKEN cDNA I830134H01 gene
Cpgi10799 19 38054427 to 38055419 992 CpG island CpG island 10799
Tssr156240 19 38055002 to 38055047 45 + TSS region transcription start site region 156240
Cep55 19 38055025 to 38074425 19400 + protein coding gene centrosomal protein 55
Tssr156241 19 38055058 to 38055075 17 + TSS region transcription start site region 156241
Gm23300 19 38071929 to 38072053 124 + snoRNA gene predicted gene, 23300
Cpgi10800 19 38096855 to 38097951 1096 CpG island CpG island 10800
Tssr156242 19 38096858 to 38096889 31 + TSS region transcription start site region 156242
Tssr156243 19 38097065 to 38097104 39 + TSS region transcription start site region 156243
Ffar4 19 38097079 to 38114263 17184 + protein coding gene free fatty acid receptor 4
Cpgi10801 19 38113474 to 38113755 281 CpG island CpG island 10801
Rbp4 19 38116620 to 38125321 8701 - protein coding gene retinol binding protein 4, plasma
Tssr156244 19 38116750 to 38116762 12 + TSS region transcription start site region 156244
Tssr159111 19 38116773 to 38116801 28 - TSS region transcription start site region 159111
Tssr159112 19 38116812 to 38116851 39 - TSS region transcription start site region 159112
Tssr159113 19 38116867 to 38116916 49 - TSS region transcription start site region 159113
Tssr159114 19 38118307 to 38118319 12 - TSS region transcription start site region 159114
Tssr156245 19 38118315 to 38118334 19 + TSS region transcription start site region 156245
Tssr159115 19 38118346 to 38118375 29 - TSS region transcription start site region 159115
Tssr159116 19 38118382 to 38118477 95 - TSS region transcription start site region 159116
Tssr159117 19 38118480 to 38118491 11 - TSS region transcription start site region 159117
Cpgi10802 19 38119224 to 38119678 454 CpG island CpG island 10802
Tssr159118 19 38124050 to 38124059 9 - TSS region transcription start site region 159118
Cpgi10803 19 38124061 to 38125257 1196 CpG island CpG island 10803
Tssr159119 19 38124083 to 38124131 48 - TSS region transcription start site region 159119
Tssr159120 19 38124329 to 38124354 25 - TSS region transcription start site region 159120
Tssr159121 19 38124364 to 38124383 19 - TSS region transcription start site region 159121
Tssr159122 19 38124410 to 38124435 25 - TSS region transcription start site region 159122
Tssr159123 19 38124553 to 38124574 21 - TSS region transcription start site region 159123
Tssr159124 19 38124637 to 38124677 40 - TSS region transcription start site region 159124
Tssr159125 19 38124801 to 38124816 15 - TSS region transcription start site region 159125
Tssr159126 19 38125234 to 38125240 6 - TSS region transcription start site region 159126
Tssr159127 19 38125245 to 38125254 9 - TSS region transcription start site region 159127
Tssr159128 19 38125258 to 38125306 48 - TSS region transcription start site region 159128
Gm32440 19 38125754 to 38134496 8742 - lncRNA gene predicted gene, 32440
Tssr156246 19 38132767 to 38132793 26 + TSS region transcription start site region 156246
Pde6c 19 38132781 to 38183955 51174 + protein coding gene phosphodiesterase 6C, cGMP specific, cone, alpha prime
Tssr156247 19 38132795 to 38132810 15 + TSS region transcription start site region 156247
Tssr156248 19 38162180 to 38162190 10 + TSS region transcription start site region 156248
Tssr156249 19 38162219 to 38162232 13 + TSS region transcription start site region 156249
Fra10ac1 19 38188481 to 38224138 35657 - protein coding gene FRA10AC1 homolog (human)
Cpgi10804 19 38223884 to 38224502 618 CpG island CpG island 10804
Tssr159129 19 38224065 to 38224095 30 - TSS region transcription start site region 159129
Tssr159130 19 38224096 to 38224183 87 - TSS region transcription start site region 159130
Tssr159131 19 38224705 to 38224719 14 - TSS region transcription start site region 159131
Gm32574 19 38257836 to 38260793 2957 - lncRNA gene predicted gene, 32574
Gm32491 19 38257928 to 38263285 5357 + lncRNA gene predicted gene, 32491