Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:25535487-26186975

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dmrt1 19 25505618 to 25604328 98710 + protein coding gene doublesex and mab-3 related transcription factor 1
Tssr155696 19 25552072 to 25552118 46 + TSS region transcription start site region 155696
Tssr155697 19 25599495 to 25599496 1 + TSS region transcription start site region 155697
Tssr155698 19 25603190 to 25603195 5 + TSS region transcription start site region 155698
Cpgi10708 19 25604663 to 25605145 482 CpG island CpG island 10708
Cpgi10709 19 25605631 to 25606457 826 CpG island CpG island 10709
Cpgi10710 19 25607581 to 25607767 186 CpG island CpG island 10710
Cpgi10711 19 25609068 to 25609460 392 CpG island CpG island 10711
Cpgi10712 19 25609959 to 25611706 1747 CpG island CpG island 10712
Tssr155699 19 25610256 to 25610261 5 + TSS region transcription start site region 155699
Tssr155700 19 25610533 to 25610553 20 + TSS region transcription start site region 155700
Dmrt3 19 25610537 to 25623920 13383 + protein coding gene doublesex and mab-3 related transcription factor 3
Tssr155701 19 25610564 to 25610576 12 + TSS region transcription start site region 155701
Tssr155702 19 25610923 to 25610947 24 + TSS region transcription start site region 155702
Cpgi10713 19 25622292 to 25623167 875 CpG island CpG island 10713
Cpgi10714 19 25635877 to 25636139 262 CpG island CpG island 10714
Cpgi10715 19 25666022 to 25666251 229 CpG island CpG island 10715
2610016A17Rik 19 25671134 to 25672239 1105 - lincRNA gene RIKEN cDNA 2610016A17 gene
Cpgi10716 19 25672021 to 25672814 793 CpG island CpG island 10716
Tssr158697 19 25672227 to 25672240 13 - TSS region transcription start site region 158697
Tssr158698 19 25672247 to 25672258 11 - TSS region transcription start site region 158698
Tssr155703 19 25672408 to 25672420 12 + TSS region transcription start site region 155703
Dmrt2 19 25672420 to 25679010 6590 + protein coding gene doublesex and mab-3 related transcription factor 2
Cpgi10717 19 25673200 to 25674683 1483 CpG island CpG island 10717
Tssr155704 19 25675217 to 25675220 3 + TSS region transcription start site region 155704
Gm34516 19 25775487 to 25946975 171488 + lncRNA gene predicted gene, 34516
Gm8825 19 25795810 to 25796807 997 - pseudogene predicted gene 8825
1700048O14Rik 19 26030730 to 26046626 15896 - lncRNA gene RIKEN cDNA 1700048O14 gene
Tssr158699 19 26046441 to 26046452 11 - TSS region transcription start site region 158699
Tssr158700 19 26046461 to 26046469 8 - TSS region transcription start site region 158700