Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 19:10534218-10766213

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123 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpsf7 19 10525266 to 10547653 22387 + protein coding gene cleavage and polyadenylation specific factor 7
Tssr155055 19 10535435 to 10535444 9 + TSS region transcription start site region 155055
Tmem216 19 10539326 to 10556297 16971 - protein coding gene transmembrane protein 216
Tssr158191 19 10554790 to 10554834 44 - TSS region transcription start site region 158191
Tssr155056 19 10554964 to 10554973 9 + TSS region transcription start site region 155056
Cpgi10612 19 10555594 to 10556205 611 CpG island CpG island 10612
Tssr158192 19 10555724 to 10555761 37 - TSS region transcription start site region 158192
Tssr5444 19 10555762 to 10555782 20 - TSS region transcription start site region 5444
Tssr158193 19 10555808 to 10555814 6 - TSS region transcription start site region 158193
Tssr158194 19 10556198 to 10556275 77 - TSS region transcription start site region 158194
Tmem138 19 10570478 to 10577362 6884 - protein coding gene transmembrane protein 138
Gm50205 19 10573512 to 10576545 3033 + unclassified gene predicted gene, 50205
Cpgi10613 19 10576811 to 10577782 971 CpG island CpG island 10613
Tssr158195 19 10577053 to 10577095 42 - TSS region transcription start site region 158195
Tssr158196 19 10577098 to 10577120 22 - TSS region transcription start site region 158196
Tssr155057 19 10577147 to 10577175 28 + TSS region transcription start site region 155057
Cyb561a3 19 10577172 to 10595961 18789 + protein coding gene cytochrome b561 family, member A3
Tssr155058 19 10577180 to 10577196 16 + TSS region transcription start site region 155058
Tssr158197 19 10577367 to 10577407 40 - TSS region transcription start site region 158197
Tssr155059 19 10577439 to 10577461 22 + TSS region transcription start site region 155059
Tssr155060 19 10577464 to 10577475 11 + TSS region transcription start site region 155060
Tssr155061 19 10577481 to 10577492 11 + TSS region transcription start site region 155061
Tssr155062 19 10582184 to 10582207 23 + TSS region transcription start site region 155062
Tssr155063 19 10582221 to 10582252 31 + TSS region transcription start site region 155063
Tssr155064 19 10582270 to 10582280 10 + TSS region transcription start site region 155064
Tssr155065 19 10582281 to 10582313 32 + TSS region transcription start site region 155065
Tssr155066 19 10582315 to 10582325 10 + TSS region transcription start site region 155066
Tssr155067 19 10589109 to 10589119 10 + TSS region transcription start site region 155067
Tkfc 19 10592197 to 10605482 13285 - protein coding gene triokinase, FMN cyclase
Tssr158198 19 10592523 to 10592552 29 - TSS region transcription start site region 158198
Tssr158199 19 10593175 to 10593186 11 - TSS region transcription start site region 158199
Cpgi10614 19 10602852 to 10603050 198 CpG island CpG island 10614
Tssr158200 19 10604304 to 10604315 11 - TSS region transcription start site region 158200
Tssr158201 19 10604316 to 10604337 21 - TSS region transcription start site region 158201
Tssr158202 19 10604353 to 10604367 14 - TSS region transcription start site region 158202
Tssr158203 19 10604394 to 10604397 3 - TSS region transcription start site region 158203
Cpgi10615 19 10605232 to 10606053 821 CpG island CpG island 10615
Tssr158204 19 10605365 to 10605405 40 - TSS region transcription start site region 158204
Tssr158205 19 10605410 to 10605466 56 - TSS region transcription start site region 158205
Tssr158206 19 10605467 to 10605470 3 - TSS region transcription start site region 158206
Tssr155068 19 10605539 to 10605554 15 + TSS region transcription start site region 155068
Tssr155069 19 10605556 to 10605614 58 + TSS region transcription start site region 155069
Ddb1 19 10605568 to 10629828 24260 + protein coding gene damage specific DNA binding protein 1
Tssr155070 19 10605627 to 10605644 17 + TSS region transcription start site region 155070
Tssr155071 19 10605684 to 10605695 11 + TSS region transcription start site region 155071
Tssr158207 19 10605868 to 10605915 47 - TSS region transcription start site region 158207
Tssr155072 19 10605919 to 10605948 29 + TSS region transcription start site region 155072
Tssr155073 19 10606273 to 10606288 15 + TSS region transcription start site region 155073
Tssr155074 19 10607792 to 10607813 21 + TSS region transcription start site region 155074
Tssr155075 19 10608247 to 10608270 23 + TSS region transcription start site region 155075
Tssr155076 19 10621868 to 10621896 28 + TSS region transcription start site region 155076
Tssr155077 19 10622337 to 10622386 49 + TSS region transcription start site region 155077
Tssr155078 19 10629306 to 10629326 20 + TSS region transcription start site region 155078
Cpgi10616 19 10634172 to 10634693 521 CpG island CpG island 10616
Vwce 19 10634218 to 10666213 31995 + protein coding gene von Willebrand factor C and EGF domains
Tssr155079 19 10634223 to 10634245 22 + TSS region transcription start site region 155079
Tssr155080 19 10634300 to 10634312 12 + TSS region transcription start site region 155080
Tssr155081 19 10634313 to 10634324 11 + TSS region transcription start site region 155081
Cpgi10617 19 10634977 to 10635359 382 CpG island CpG island 10617
4930524O05Rik 19 10645694 to 10648053 2359 - lncRNA gene RIKEN cDNA 4930524O05 gene
Tssr155082 19 10648226 to 10648233 7 + TSS region transcription start site region 155082
Tssr158208 19 10667610 to 10667617 7 - TSS region transcription start site region 158208
Pga5 19 10668957 to 10678071 9114 - protein coding gene pepsinogen 5, group I
Tssr158209 19 10668997 to 10669006 9 - TSS region transcription start site region 158209
Tssr155083 19 10669351 to 10669380 29 + TSS region transcription start site region 155083
Tssr158210 19 10669450 to 10669459 9 - TSS region transcription start site region 158210
Tssr158211 19 10669586 to 10669612 26 - TSS region transcription start site region 158211
Tssr158212 19 10671858 to 10671871 13 - TSS region transcription start site region 158212
Tssr158213 19 10673667 to 10673681 14 - TSS region transcription start site region 158213
Tssr158214 19 10673733 to 10673745 12 - TSS region transcription start site region 158214
Tssr158215 19 10674901 to 10674930 29 - TSS region transcription start site region 158215
Tssr155084 19 10675040 to 10675051 11 + TSS region transcription start site region 155084
Tssr158216 19 10675073 to 10675080 7 - TSS region transcription start site region 158216
Tssr155085 19 10675084 to 10675092 8 + TSS region transcription start site region 155085
Tssr158217 19 10675101 to 10675108 7 - TSS region transcription start site region 158217
Tssr158218 19 10675119 to 10675158 39 - TSS region transcription start site region 158218
Tssr158219 19 10676430 to 10676438 8 - TSS region transcription start site region 158219
Tssr158220 19 10676663 to 10676670 7 - TSS region transcription start site region 158220
Tssr158221 19 10676680 to 10676727 47 - TSS region transcription start site region 158221
Tssr158222 19 10676777 to 10676832 55 - TSS region transcription start site region 158222
Tssr158223 19 10677246 to 10677250 4 - TSS region transcription start site region 158223
Tssr158224 19 10678001 to 10678020 19 - TSS region transcription start site region 158224
Tssr158225 19 10678027 to 10678038 11 - TSS region transcription start site region 158225
2210404E10Rik 19 10684793 to 10685558 765 + lncRNA gene RIKEN cDNA 2210404E10 gene
Tssr158226 19 10685175 to 10685209 34 - TSS region transcription start site region 158226
Cpgi10618 19 10688394 to 10689515 1121 CpG island CpG island 10618
Tssr155086 19 10688724 to 10688740 16 + TSS region transcription start site region 155086
Vps37c 19 10688735 to 10714627 25892 + protein coding gene vacuolar protein sorting 37C
Tssr155087 19 10688744 to 10688818 74 + TSS region transcription start site region 155087
Tssr155088 19 10688918 to 10688959 41 + TSS region transcription start site region 155088
Tssr155089 19 10689228 to 10689243 15 + TSS region transcription start site region 155089
Tssr155090 19 10689256 to 10689279 23 + TSS region transcription start site region 155090
Tssr155091 19 10698530 to 10698565 35 + TSS region transcription start site region 155091
Tssr155092 19 10699336 to 10699349 13 + TSS region transcription start site region 155092
Tssr155093 19 10699365 to 10699376 11 + TSS region transcription start site region 155093
Tssr155094 19 10699379 to 10699394 15 + TSS region transcription start site region 155094
D19Mit126 19 10706389 to 10706508 119 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology 126
Tssr155095 19 10712924 to 10712944 20 + TSS region transcription start site region 155095
Tssr155096 19 10712955 to 10712968 13 + TSS region transcription start site region 155096
Tssr155097 19 10713029 to 10713043 14 + TSS region transcription start site region 155097
Cd5 19 10718107 to 10739026 20919 - protein coding gene CD5 antigen
Tssr158227 19 10719122 to 10719126 4 - TSS region transcription start site region 158227
Tssr158228 19 10719418 to 10719430 12 - TSS region transcription start site region 158228
Cpgi10619 19 10723213 to 10723386 173 CpG island CpG island 10619
Tssr158229 19 10725301 to 10725311 10 - TSS region transcription start site region 158229
Tssr158230 19 10726293 to 10726297 4 - TSS region transcription start site region 158230
Tssr155098 19 10732116 to 10732131 15 + TSS region transcription start site region 155098
Tssr155099 19 10732314 to 10732325 11 + TSS region transcription start site region 155099
Tssr155100 19 10735262 to 10735280 18 + TSS region transcription start site region 155100
Tssr158231 19 10738844 to 10738866 22 - TSS region transcription start site region 158231
Tssr158232 19 10738869 to 10738935 66 - TSS region transcription start site region 158232
Tssr158233 19 10738939 to 10738956 17 - TSS region transcription start site region 158233
Tssr158234 19 10738971 to 10738982 11 - TSS region transcription start site region 158234
Tssr155101 19 10739117 to 10739126 9 + TSS region transcription start site region 155101
D19Ihc1 19 10739480 to 10739774 294 DNA segment DNA segment, Chr 19, Immologia Hospital Clinic 1
Tssr158235 19 10740723 to 10740746 23 - TSS region transcription start site region 158235
Tssr155102 19 10740935 to 10740949 14 + TSS region transcription start site region 155102
A430093F15Rik 19 10740947 to 10786043 45096 + lncRNA gene RIKEN cDNA A430093F15 gene
Tssr155103 19 10741891 to 10741897 6 + TSS region transcription start site region 155103
Tssr155104 19 10747983 to 10747999 16 + TSS region transcription start site region 155104
D19Mit22 19 10751974 to 10752075 101 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 22
Tssr155105 19 10759798 to 10759840 42 + TSS region transcription start site region 155105
Tssr158236 19 10760065 to 10760080 15 - TSS region transcription start site region 158236