Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:54981656-55183249

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp608 18 54888045 to 54990180 102135 - protein coding gene zinc finger protein 608
Gm26742 18 54981435 to 54987689 6254 + lincRNA gene predicted gene, 26742
Tssr153351 18 54985214 to 54985219 5 - TSS region transcription start site region 153351
Tssr153352 18 54987674 to 54987725 51 - TSS region transcription start site region 153352
Cpgi10063 18 54987681 to 54988098 417 CpG island CpG island 10063
Tssr153353 18 54988013 to 54988092 79 - TSS region transcription start site region 153353
Tssr153354 18 54988096 to 54988112 16 - TSS region transcription start site region 153354
Tssr153355 18 54988838 to 54988853 15 - TSS region transcription start site region 153355
Tssr153356 18 54989598 to 54989619 21 - TSS region transcription start site region 153356
Tssr153357 18 54990081 to 54990122 41 - TSS region transcription start site region 153357
Tssr153358 18 54990124 to 54990144 20 - TSS region transcription start site region 153358
Tssr151119 18 54990280 to 54990315 35 + TSS region transcription start site region 151119
Gm4221 18 54990310 to 55079414 89104 + lincRNA gene predicted gene 4221
Tssr153359 18 54990332 to 54990355 23 - TSS region transcription start site region 153359
Tssr153360 18 54990357 to 54990405 48 - TSS region transcription start site region 153360
Tssr153361 18 54990594 to 54990654 60 - TSS region transcription start site region 153361
Tssr5321 18 54990654 to 54990683 29 - TSS region transcription start site region 5321
Tssr153362 18 54992525 to 54992540 15 - TSS region transcription start site region 153362
Tssr153363 18 54992552 to 54992597 45 - TSS region transcription start site region 153363
Cpgi10064 18 54992914 to 54993068 154 CpG island CpG island 10064
Gm41731 18 55022585 to 55037586 15001 - lncRNA gene predicted gene, 41731
D18Mit121 18 55037501 to 55037590 89 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 121
Tssr151120 18 55042166 to 55042172 6 + TSS region transcription start site region 151120
Tssr151121 18 55057557 to 55057580 23 + TSS region transcription start site region 151121
5430416G10Rik 18 55081656 to 55083249 1593 unclassified gene RIKEN cDNA 5430416G10 gene
Gm24183 18 55085565 to 55085657 92 - snoRNA gene predicted gene, 24183
Gm34011 18 55126838 to 55131737 4899 - lncRNA gene predicted gene, 34011
Tssr153364 18 55131256 to 55131261 5 - TSS region transcription start site region 153364
Gm34073 18 55143574 to 55143785 211 + unclassified non-coding RNA gene predicted gene, 34073
Gm22597 18 55179840 to 55179919 79 + snRNA gene predicted gene, 22597