Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:35216396-35549390

15 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ctnna1	18	35118912 to 35254775	135863	+	protein coding gene	catenin (cadherin associated protein), alpha 1
Tssr150520	18	35220849 to 35220852	3	+	TSS region	transcription start site region 150520
Tssr150521	18	35235499 to 35235517	18	+	TSS region	transcription start site region 150521
Tssr152866	18	35258982 to 35258985	3	-	TSS region	transcription start site region 152866
Sil1	18	35266400 to 35498925	232525	-	protein coding gene	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)
Tssr152867	18	35343032 to 35343036	4	-	TSS region	transcription start site region 152867
Tssr5278	18	35438256 to 35438261	5	+	TSS region	transcription start site region 5278
Cpgi9835	18	35498504 to 35499151	647		CpG island	CpG island 9835
Tssr152868	18	35498816 to 35498829	13	-	TSS region	transcription start site region 152868
Tssr152869	18	35498844 to 35498853	9	-	TSS region	transcription start site region 152869
Tssr152870	18	35498856 to 35498925	69	-	TSS region	transcription start site region 152870
Gm41691	18	35502712 to 35517526	14814	-	lncRNA gene	predicted gene, 41691
Tssr150522	18	35536539 to 35536546	7	+	TSS region	transcription start site region 150522
Gm5239	18	35536583 to 35536951	368	+	pseudogene	predicted pseudogene 5239
Gm41692	18	35540859 to 35542689	1830	+	lncRNA gene	predicted gene, 41692