Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:12594896-12743863

24 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr150104	18	12599894 to 12599925	31	+	TSS region	transcription start site region 150104
Gm50063	18	12642292 to 12644364	2072	-	antisense lncRNA gene	predicted gene, 50063
Tssr150105	18	12642596 to 12642609	13	+	TSS region	transcription start site region 150105
Cpgi9720	18	12643215 to 12644503	1288		CpG island	CpG island 9720
Tssr150106	18	12643329 to 12643395	66	+	TSS region	transcription start site region 150106
Tssr150107	18	12643413 to 12643424	11	+	TSS region	transcription start site region 150107
Tssr150108	18	12643475 to 12643500	25	+	TSS region	transcription start site region 150108
Ttc39c	18	12643533 to 12737052	93519	+	protein coding gene	tetratricopeptide repeat domain 39C
Tssr150109	18	12643742 to 12643822	80	+	TSS region	transcription start site region 150109
Tssr152466	18	12644359 to 12644376	17	-	TSS region	transcription start site region 152466
Gm41668	18	12647517 to 12648419	902	-	lncRNA gene	predicted gene, 41668
Tssr152467	18	12648454 to 12648472	18	-	TSS region	transcription start site region 152467
Tssr150110	18	12651813 to 12651886	73	+	TSS region	transcription start site region 150110
Tssr150111	18	12651960 to 12651990	30	+	TSS region	transcription start site region 150111
Tssr150112	18	12652022 to 12652084	62	+	TSS region	transcription start site region 150112
Tssr150113	18	12662003 to 12662013	10	+	TSS region	transcription start site region 150113
Mir1948	18	12714811 to 12714895	84	+	miRNA gene	microRNA 1948
Tssr150114	18	12734809 to 12734813	4	+	TSS region	transcription start site region 150114
Cabyr	18	12740322 to 12755260	14938	+	protein coding gene	calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
Cpgi9721	18	12741230 to 12741604	374		CpG island	CpG island 9721
Tssr5248	18	12741317 to 12741328	11	+	TSS region	transcription start site region 5248
Tssr150115	18	12741339 to 12741355	16	+	TSS region	transcription start site region 150115
Gm7599	18	12742464 to 12743259	795	-	pseudogene	predicted gene 7599
Tssr150116	18	12743142 to 12743145	3	+	TSS region	transcription start site region 150116