Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:12487596-12797609

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lama3 18 12333819 to 12583013 249194 + protein coding gene laminin, alpha 3
Tssr5247 18 12490782 to 12490790 8 + TSS region transcription start site region 5247
Tssr150097 18 12490813 to 12490820 7 + TSS region transcription start site region 150097
Gm29199 18 12498688 to 12499462 774 - pseudogene predicted gene 29199
Gm29200 18 12501190 to 12504426 3236 - antisense lncRNA gene predicted gene 29200
Tssr150098 18 12504116 to 12504125 9 + TSS region transcription start site region 150098
Tssr150099 18 12504143 to 12504156 13 + TSS region transcription start site region 150099
Tssr150100 18 12504161 to 12504168 7 + TSS region transcription start site region 150100
Tssr150101 18 12504178 to 12504207 29 + TSS region transcription start site region 150101
Tssr150102 18 12523992 to 12524020 28 + TSS region transcription start site region 150102
Tssr150103 18 12569260 to 12569272 12 + TSS region transcription start site region 150103
Gm22340 18 12578424 to 12578537 113 - rRNA gene predicted gene, 22340
Tssr150104 18 12599894 to 12599925 31 + TSS region transcription start site region 150104
Gm50063 18 12642292 to 12644364 2072 - antisense lncRNA gene predicted gene, 50063
Tssr150105 18 12642596 to 12642609 13 + TSS region transcription start site region 150105
Cpgi9720 18 12643215 to 12644503 1288 CpG island CpG island 9720
Tssr150106 18 12643329 to 12643395 66 + TSS region transcription start site region 150106
Tssr150107 18 12643413 to 12643424 11 + TSS region transcription start site region 150107
Tssr150108 18 12643475 to 12643500 25 + TSS region transcription start site region 150108
Ttc39c 18 12643533 to 12737052 93519 + protein coding gene tetratricopeptide repeat domain 39C
Tssr150109 18 12643742 to 12643822 80 + TSS region transcription start site region 150109
Tssr152466 18 12644359 to 12644376 17 - TSS region transcription start site region 152466
Gm41668 18 12647517 to 12648419 902 - lncRNA gene predicted gene, 41668
Tssr152467 18 12648454 to 12648472 18 - TSS region transcription start site region 152467
Tssr150110 18 12651813 to 12651886 73 + TSS region transcription start site region 150110
Tssr150111 18 12651960 to 12651990 30 + TSS region transcription start site region 150111
Tssr150112 18 12652022 to 12652084 62 + TSS region transcription start site region 150112
Tssr150113 18 12662003 to 12662013 10 + TSS region transcription start site region 150113
Mir1948 18 12714811 to 12714895 84 + miRNA gene microRNA 1948
Tssr150114 18 12734809 to 12734813 4 + TSS region transcription start site region 150114
Cabyr 18 12740322 to 12755260 14938 + protein coding gene calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
Cpgi9721 18 12741230 to 12741604 374 CpG island CpG island 9721
Tssr5248 18 12741317 to 12741328 11 + TSS region transcription start site region 5248
Tssr150115 18 12741339 to 12741355 16 + TSS region transcription start site region 150115
Gm7599 18 12742464 to 12743259 795 - pseudogene predicted gene 7599
Tssr150116 18 12743142 to 12743145 3 + TSS region transcription start site region 150116
Tssr5249 18 12744573 to 12744577 4 + TSS region transcription start site region 5249
Osbpl1a 18 12755314 to 12941841 186527 - protein coding gene oxysterol binding protein-like 1A