Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:93168147-96048148

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pregq4 17 57227447 to 93199751 35972304 QTL pregnancy QTL 4
Hbnr3 17 73800656 to 93199751 19399095 QTL Heligmosomoides bakeri nematode resistance 3
Gm49997 17 93168512 to 93168839 327 + pseudogene predicted gene, 49997
Gm49998 17 93192398 to 93192623 225 - pseudogene predicted gene, 49998
Gm32465 17 93194341 to 93202223 7882 - lncRNA gene predicted gene, 32465
Tssr146260 17 93199008 to 93199033 25 + TSS region transcription start site region 146260
Adcyap1 17 93199017 to 93206537 7520 + protein coding gene adenylate cyclase activating polypeptide 1
Tssr146261 17 93199117 to 93199146 29 + TSS region transcription start site region 146261
Tssr146262 17 93199162 to 93199173 11 + TSS region transcription start site region 146262
Tssr146263 17 93199348 to 93199408 60 + TSS region transcription start site region 146263
Tssr146264 17 93199507 to 93199518 11 + TSS region transcription start site region 146264
D17Mit123.2 17 93199526 to 93199644 118 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 123.2
D17Mit123 17 93199619 to 93199751 132 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 123
Cpgi9654 17 93200808 to 93201078 270 CpG island CpG island 9654
Cpgi9655 17 93202070 to 93202556 486 CpG island CpG island 9655
Cpgi9656 17 93202744 to 93203040 296 CpG island CpG island 9656
Cpgi9657 17 93203796 to 93203998 202 CpG island CpG island 9657
Gm25935 17 93246708 to 93246814 106 - snRNA gene predicted gene, 25935
Gm9665 17 93316720 to 93317261 541 - pseudogene predicted gene 9665
Gm6764 17 93331463 to 93332937 1474 + pseudogene predicted gene 6764
Tssr146265 17 93336165 to 93336170 5 + TSS region transcription start site region 146265
Gm50001 17 93391347 to 93391698 351 - pseudogene predicted gene, 50001
Gm50002 17 93680334 to 93680665 331 - pseudogene predicted gene, 50002
Gm50003 17 93680752 to 93681034 282 - pseudogene predicted gene, 50003
Tssr5233 17 93711918 to 93711919 1 - TSS region transcription start site region 5233
Gm50004 17 94131878 to 94132271 393 - pseudogene predicted gene, 50004
Gm32512 17 94164557 to 94176816 12259 - lncRNA gene predicted gene, 32512
Gm22593 17 94328755 to 94328863 108 - snRNA gene predicted gene, 22593
Tssr146266 17 94608147 to 94608148 1 + TSS region transcription start site region 146266
Gm9416 17 94608185 to 94608497 312 + pseudogene predicted gene 9416
Gm50005 17 94660397 to 94660855 458 + pseudogene predicted gene, 50005
Gm41655 17 94666227 to 94671517 5290 - pseudogene predicted gene, 41655
Gm50006 17 94692889 to 94693341 452 + pseudogene predicted gene, 50006
Mettl4 17 94722590 to 94750019 27429 - protein coding gene methyltransferase like 4
5430439M09Rik 17 94722593 to 94723289 696 unclassified gene RIKEN cDNA 5430439M09 gene
Tssr149877 17 94749506 to 94749509 3 - TSS region transcription start site region 149877
Cpgi9658 17 94749541 to 94750388 847 CpG island CpG island 9658
Tssr149878 17 94749874 to 94749887 13 - TSS region transcription start site region 149878
Tssr149879 17 94749971 to 94750046 75 - TSS region transcription start site region 149879
Tssr146267 17 94750095 to 94750121 26 + TSS region transcription start site region 146267
2700099C18Rik 17 94750100 to 94775129 25029 + pseudogene RIKEN cDNA 2700099C18 gene
Tssr146268 17 94750125 to 94750141 16 + TSS region transcription start site region 146268
Gm27038 17 94756698 to 94756872 174 - pseudogene predicted gene, 27038
Gm1976 17 94759944 to 94834799 74855 - lincRNA gene predicted gene 1976
Gm23964 17 94764825 to 94764931 106 + rRNA gene predicted gene, 23964
Tssr5234 17 94774459 to 94774505 46 + TSS region transcription start site region 5234
Amd-ps7 17 94803193 to 94803818 625 + pseudogene S-adenosylmethionine decarboxylase, pseudogene 7
Gm50009 17 94811611 to 94812922 1311 - unclassified gene predicted gene, 50009
Gm50010 17 94814741 to 94816063 1322 - unclassified gene predicted gene, 50010
Tssr149880 17 94834410 to 94834443 33 - TSS region transcription start site region 149880
Tssr149881 17 94834743 to 94834759 16 - TSS region transcription start site region 149881
Tssr149882 17 94834768 to 94834804 36 - TSS region transcription start site region 149882
Tssr146269 17 94834888 to 94834924 36 + TSS region transcription start site region 146269
Gm26734 17 94834906 to 94836642 1736 + lincRNA gene predicted gene, 26734
Gm19853 17 94858219 to 94858618 399 - pseudogene predicted gene, 19853
Tssr146270 17 94864886 to 94864922 36 + TSS region transcription start site region 146270
Gm20939 17 94864918 to 94878321 13403 + protein coding gene predicted gene, 20939
Tssr146271 17 94864928 to 94864933 5 + TSS region transcription start site region 146271
Tssr146272 17 94864937 to 94864946 9 + TSS region transcription start site region 146272
Gm23102 17 94869873 to 94869988 115 - snRNA gene predicted gene, 23102