MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:50518508-50878704

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Plcl2	17	50509403 to 50688484	179081	+	protein coding gene	phospholipase C-like 2
D17Mit270	17	50520502 to 50520624	122		DNA segment	DNA Segment, Chr 17, Massachusetts Institute of Technology-270
Tssr145151	17	50525302 to 50525309	7	+	TSS region	transcription start site region 145151
Tssr145152	17	50528925 to 50528936	11	+	TSS region	transcription start site region 145152
Tssr145153	17	50528951 to 50528967	16	+	TSS region	transcription start site region 145153
Tssr145154	17	50528979 to 50528999	20	+	TSS region	transcription start site region 145154
Tssr145155	17	50530917 to 50530929	12	+	TSS region	transcription start site region 145155
Tssr145156	17	50539468 to 50539487	19	+	TSS region	transcription start site region 145156
Tssr145157	17	50596489 to 50596505	16	+	TSS region	transcription start site region 145157
Cpgi9306	17	50608373 to 50608571	198		CpG island	CpG island 9306
Tssr145158	17	50643093 to 50643105	12	+	TSS region	transcription start site region 145158
Tssr148600	17	50668973 to 50668976	3	-	TSS region	transcription start site region 148600
Cpgi9307	17	50677451 to 50677625	174		CpG island	CpG island 9307
Cpgi9308	17	50698508 to 50698704	196		CpG island	CpG island 9308
Tssr145159	17	50698542 to 50698553	11	+	TSS region	transcription start site region 145159
Gm7334	17	50698688 to 50699443	755	+	pseudogene	predicted gene 7334
Tbc1d5	17	50733124 to 51179352	446228	-	protein coding gene	TBC1 domain family, member 5
Gm41598	17	50791436 to 50793590	2154	+	lncRNA gene	predicted gene, 41598