Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:47745734-47886079

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tfeb 17 47737037 to 47792416 55379 + protein coding gene transcription factor EB
Tssr145053 17 47749099 to 47749114 15 + TSS region transcription start site region 145053
Tssr148485 17 47754233 to 47754245 12 - TSS region transcription start site region 148485
Tssr145054 17 47759241 to 47759245 4 + TSS region transcription start site region 145054
Tssr145055 17 47761443 to 47761457 14 + TSS region transcription start site region 145055
Tssr145056 17 47761510 to 47761538 28 + TSS region transcription start site region 145056
Tssr145057 17 47767320 to 47767355 35 + TSS region transcription start site region 145057
Tssr148486 17 47768761 to 47768788 27 - TSS region transcription start site region 148486
Tssr145058 17 47768935 to 47768986 51 + TSS region transcription start site region 145058
Tssr145059 17 47769191 to 47769201 10 + TSS region transcription start site region 145059
Tssr145060 17 47785703 to 47785720 17 + TSS region transcription start site region 145060
Tssr145061 17 47785729 to 47785739 10 + TSS region transcription start site region 145061
Mdfi 17 47815328 to 47834691 19363 - protein coding gene MyoD family inhibitor
Cpgi9272 17 47815734 to 47816079 345 CpG island CpG island 9272
Cpgi9273 17 47820585 to 47820937 352 CpG island CpG island 9273
Cpgi9274 17 47832829 to 47833779 950 CpG island CpG island 9274
Tssr148487 17 47833225 to 47833254 29 - TSS region transcription start site region 148487
Tssr148488 17 47833256 to 47833279 23 - TSS region transcription start site region 148488
Cpgi9275 17 47834177 to 47834672 495 CpG island CpG island 9275
Tssr148489 17 47834434 to 47834447 13 - TSS region transcription start site region 148489
Tssr148490 17 47834483 to 47834513 30 - TSS region transcription start site region 148490
Tssr148491 17 47834521 to 47834534 13 - TSS region transcription start site region 148491
Tssr148492 17 47834541 to 47834556 15 - TSS region transcription start site region 148492
Tssr148493 17 47834682 to 47834690 8 - TSS region transcription start site region 148493
Gm25201 17 47840816 to 47840985 169 - snRNA gene predicted gene, 25201
n-R5s28 17 47848834 to 47848952 118 + rRNA gene nuclear encoded rRNA 5S 28
D17Mit37 17 47852590 to 47852717 127 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 37
D17Mit202 17 47855482 to 47855573 91 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 202
Tssr145062 17 47862275 to 47862287 12 + TSS region transcription start site region 145062
Cpgi9276 17 47864593 to 47864902 309 CpG island CpG island 9276
Foxp4 17 47867133 to 47924643 57510 - protein coding gene forkhead box P4
Tssr148494 17 47867843 to 47867862 19 - TSS region transcription start site region 148494
Tssr148495 17 47868414 to 47868442 28 - TSS region transcription start site region 148495
Cpgi9277 17 47878410 to 47879097 687 CpG island CpG island 9277
Tssr148496 17 47878511 to 47878528 17 - TSS region transcription start site region 148496
Tssr148497 17 47878696 to 47878740 44 - TSS region transcription start site region 148497
Tssr148498 17 47878875 to 47878887 12 - TSS region transcription start site region 148498
Tssr148499 17 47878890 to 47878966 76 - TSS region transcription start site region 148499
Tssr148500 17 47878976 to 47878985 9 - TSS region transcription start site region 148500
Tssr148501 17 47879046 to 47879088 42 - TSS region transcription start site region 148501