Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:47730729-47840739

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74 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pgc 17 47726842 to 47734478 7636 + protein coding gene progastricsin (pepsinogen C)
Tssr145023 17 47730747 to 47730766 19 + TSS region transcription start site region 145023
Tssr148469 17 47730750 to 47730763 13 - TSS region transcription start site region 148469
Tssr145024 17 47730858 to 47730868 10 + TSS region transcription start site region 145024
Tssr145025 17 47731202 to 47731231 29 + TSS region transcription start site region 145025
Tssr145026 17 47731458 to 47731471 13 + TSS region transcription start site region 145026
Tssr5149 17 47731483 to 47731488 5 + TSS region transcription start site region 5149
Tssr145027 17 47732391 to 47732412 21 + TSS region transcription start site region 145027
Tssr145028 17 47732419 to 47732453 34 + TSS region transcription start site region 145028
Tssr148470 17 47732427 to 47732438 11 - TSS region transcription start site region 148470
Tssr148471 17 47732446 to 47732460 14 - TSS region transcription start site region 148471
Tssr145029 17 47732460 to 47732470 10 + TSS region transcription start site region 145029
Tssr148472 17 47732462 to 47732474 12 - TSS region transcription start site region 148472
Tssr148473 17 47732479 to 47732488 9 - TSS region transcription start site region 148473
Tssr148474 17 47732498 to 47732506 8 - TSS region transcription start site region 148474
Tssr145030 17 47732954 to 47732965 11 + TSS region transcription start site region 145030
Tssr145031 17 47732970 to 47732973 3 + TSS region transcription start site region 145031
Tssr145032 17 47732978 to 47733058 80 + TSS region transcription start site region 145032
Tssr148475 17 47733027 to 47733050 23 - TSS region transcription start site region 148475
Tssr148476 17 47733055 to 47733077 22 - TSS region transcription start site region 148476
Tssr145033 17 47733059 to 47733060 1 + TSS region transcription start site region 145033
Tssr145034 17 47733061 to 47733071 10 + TSS region transcription start site region 145034
Tssr148477 17 47733086 to 47733110 24 - TSS region transcription start site region 148477
Tssr145035 17 47733751 to 47733755 4 + TSS region transcription start site region 145035
Tssr145036 17 47733759 to 47733784 25 + TSS region transcription start site region 145036
Tssr148478 17 47733798 to 47733810 12 - TSS region transcription start site region 148478
Tssr145037 17 47733803 to 47733811 8 + TSS region transcription start site region 145037
Tssr145038 17 47733813 to 47733830 17 + TSS region transcription start site region 145038
Tssr148479 17 47733836 to 47733862 26 - TSS region transcription start site region 148479
Tssr145039 17 47734178 to 47734201 23 + TSS region transcription start site region 145039
Tssr145040 17 47734202 to 47734235 33 + TSS region transcription start site region 145040
Tssr145041 17 47734239 to 47734247 8 + TSS region transcription start site region 145041
Tssr145042 17 47734257 to 47734298 41 + TSS region transcription start site region 145042
Tssr145043 17 47734312 to 47734324 12 + TSS region transcription start site region 145043
Tssr148480 17 47734314 to 47734328 14 - TSS region transcription start site region 148480
Tssr145044 17 47734329 to 47734337 8 + TSS region transcription start site region 145044
Tssr145045 17 47734339 to 47734354 15 + TSS region transcription start site region 145045
Tssr148481 17 47734344 to 47734364 20 - TSS region transcription start site region 148481
Tssr145046 17 47734358 to 47734405 47 + TSS region transcription start site region 145046
Tssr145047 17 47734406 to 47734421 15 + TSS region transcription start site region 145047
Tssr145048 17 47734438 to 47734441 3 + TSS region transcription start site region 145048
Tssr148482 17 47734475 to 47734481 6 - TSS region transcription start site region 148482
Cpgi9270 17 47736887 to 47738937 2050 CpG island CpG island 9270
Tssr145049 17 47737036 to 47737107 71 + TSS region transcription start site region 145049
Tfeb 17 47737037 to 47792416 55379 + protein coding gene transcription factor EB
Tssr145050 17 47737125 to 47737149 24 + TSS region transcription start site region 145050
Tssr145051 17 47737174 to 47737207 33 + TSS region transcription start site region 145051
Tssr148483 17 47737777 to 47737797 20 - TSS region transcription start site region 148483
Tssr145052 17 47738145 to 47738189 44 + TSS region transcription start site region 145052
Tssr148484 17 47739355 to 47739364 9 - TSS region transcription start site region 148484
Cpgi9271 17 47744357 to 47744630 273 CpG island CpG island 9271
Tssr145053 17 47749099 to 47749114 15 + TSS region transcription start site region 145053
Tssr148485 17 47754233 to 47754245 12 - TSS region transcription start site region 148485
Tssr145054 17 47759241 to 47759245 4 + TSS region transcription start site region 145054
Tssr145055 17 47761443 to 47761457 14 + TSS region transcription start site region 145055
Tssr145056 17 47761510 to 47761538 28 + TSS region transcription start site region 145056
Tssr145057 17 47767320 to 47767355 35 + TSS region transcription start site region 145057
Tssr148486 17 47768761 to 47768788 27 - TSS region transcription start site region 148486
Tssr145058 17 47768935 to 47768986 51 + TSS region transcription start site region 145058
Tssr145059 17 47769191 to 47769201 10 + TSS region transcription start site region 145059
Tssr145060 17 47785703 to 47785720 17 + TSS region transcription start site region 145060
Tssr145061 17 47785729 to 47785739 10 + TSS region transcription start site region 145061
Mdfi 17 47815328 to 47834691 19363 - protein coding gene MyoD family inhibitor
Cpgi9272 17 47815734 to 47816079 345 CpG island CpG island 9272
Cpgi9273 17 47820585 to 47820937 352 CpG island CpG island 9273
Cpgi9274 17 47832829 to 47833779 950 CpG island CpG island 9274
Tssr148487 17 47833225 to 47833254 29 - TSS region transcription start site region 148487
Tssr148488 17 47833256 to 47833279 23 - TSS region transcription start site region 148488
Cpgi9275 17 47834177 to 47834672 495 CpG island CpG island 9275
Tssr148489 17 47834434 to 47834447 13 - TSS region transcription start site region 148489
Tssr148490 17 47834483 to 47834513 30 - TSS region transcription start site region 148490
Tssr148491 17 47834521 to 47834534 13 - TSS region transcription start site region 148491
Tssr148492 17 47834541 to 47834556 15 - TSS region transcription start site region 148492
Tssr148493 17 47834682 to 47834690 8 - TSS region transcription start site region 148493