Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:47414694-47504817

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700001C19Rik 17 47412734 to 47437376 24642 - protein coding gene RIKEN cDNA 1700001C19 gene
Tssr148428 17 47414705 to 47414725 20 - TSS region transcription start site region 148428
Tssr148429 17 47414729 to 47414736 7 - TSS region transcription start site region 148429
Tssr148430 17 47421852 to 47421864 12 - TSS region transcription start site region 148430
Tssr148431 17 47421873 to 47421885 12 - TSS region transcription start site region 148431
Tssr148432 17 47422539 to 47422554 15 - TSS region transcription start site region 148432
Tssr148433 17 47422579 to 47422588 9 - TSS region transcription start site region 148433
Tssr148434 17 47433264 to 47433267 3 - TSS region transcription start site region 148434
Tssr148435 17 47433408 to 47433430 22 - TSS region transcription start site region 148435
Tssr148436 17 47433432 to 47433456 24 - TSS region transcription start site region 148436
Cpgi9259 17 47436194 to 47437392 1198 CpG island CpG island 9259
Tssr144911 17 47436585 to 47436595 10 + TSS region transcription start site region 144911
Tssr144912 17 47436601 to 47436608 7 + TSS region transcription start site region 144912
Tssr144913 17 47436616 to 47436639 23 + TSS region transcription start site region 144913
AI661453 17 47436639 to 47470638 33999 + protein coding gene expressed sequence AI661453
Tssr144914 17 47436647 to 47436658 11 + TSS region transcription start site region 144914
Tssr144915 17 47436731 to 47436743 12 + TSS region transcription start site region 144915
Tssr148437 17 47437220 to 47437247 27 - TSS region transcription start site region 148437
Tssr148438 17 47437365 to 47437391 26 - TSS region transcription start site region 148438
D17Mit250 17 47459685 to 47459809 124 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 250
D17Dcr10 17 47459694 to 47459817 123 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 10
Tssr148439 17 47465829 to 47465841 12 - TSS region transcription start site region 148439
Tssr144916 17 47468337 to 47468378 41 + TSS region transcription start site region 144916
Cpgi9260 17 47468370 to 47468997 627 CpG island CpG island 9260
Taf8 17 47483414 to 47502321 18907 - protein coding gene TATA-box binding protein associated factor 8
Tssr148440 17 47501899 to 47501946 47 - TSS region transcription start site region 148440
Cpgi9261 17 47501996 to 47502390 394 CpG island CpG island 9261
Tssr148441 17 47502276 to 47502296 20 - TSS region transcription start site region 148441