Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:46549471-46644504

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Srf 17 46548329 to 46556175 7846 - protein coding gene serum response factor
Tssr148331 17 46552840 to 46552859 19 - TSS region transcription start site region 148331
Tssr148332 17 46552862 to 46552868 6 - TSS region transcription start site region 148332
Tssr148333 17 46552874 to 46552891 17 - TSS region transcription start site region 148333
Mir6976 17 46553827 to 46553889 62 - miRNA gene microRNA 6976
Cpgi9233 17 46554727 to 46556650 1923 CpG island CpG island 9233
Tssr5134 17 46555198 to 46555227 29 + TSS region transcription start site region 5134
Tssr144859 17 46555242 to 46555256 14 + TSS region transcription start site region 144859
Tssr148334 17 46555460 to 46555484 24 - TSS region transcription start site region 148334
Tssr148335 17 46556021 to 46556028 7 - TSS region transcription start site region 148335
Tssr148336 17 46556037 to 46556044 7 - TSS region transcription start site region 148336
Tssr148337 17 46556104 to 46556115 11 - TSS region transcription start site region 148337
Tssr148338 17 46556129 to 46556148 19 - TSS region transcription start site region 148338
Tssr148339 17 46556158 to 46556188 30 - TSS region transcription start site region 148339
Tssr148340 17 46556204 to 46556220 16 - TSS region transcription start site region 148340
Tssr144860 17 46556421 to 46556429 8 + TSS region transcription start site region 144860
Ptk7 17 46564471 to 46629504 65033 - protein coding gene PTK7 protein tyrosine kinase 7
Tssr5135 17 46572107 to 46572110 3 - TSS region transcription start site region 5135
Tssr148341 17 46587082 to 46587088 6 - TSS region transcription start site region 148341
Tssr148342 17 46590467 to 46590484 17 - TSS region transcription start site region 148342
Tssr148343 17 46590486 to 46590510 24 - TSS region transcription start site region 148343
Tssr148344 17 46599755 to 46599761 6 - TSS region transcription start site region 148344
Tssr144861 17 46623987 to 46624011 24 + TSS region transcription start site region 144861
Cpgi9234 17 46628527 to 46630089 1562 CpG island CpG island 9234
Tssr148345 17 46629357 to 46629378 21 - TSS region transcription start site region 148345
Tssr148346 17 46629404 to 46629419 15 - TSS region transcription start site region 148346
Tssr148347 17 46629420 to 46629500 80 - TSS region transcription start site region 148347
Tssr148348 17 46629731 to 46629742 11 - TSS region transcription start site region 148348
Tssr148349 17 46630033 to 46630082 49 - TSS region transcription start site region 148349
Klc4 17 46630624 to 46646022 15398 - protein coding gene kinesin light chain 4
Tssr148350 17 46637244 to 46637249 5 - TSS region transcription start site region 148350
Tssr148351 17 46640034 to 46640045 11 - TSS region transcription start site region 148351
Tssr148352 17 46640060 to 46640072 12 - TSS region transcription start site region 148352
Tssr148353 17 46640082 to 46640118 36 - TSS region transcription start site region 148353
Tssr148354 17 46640123 to 46640134 11 - TSS region transcription start site region 148354