Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:43609558-43879569

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bbaa28 17 25365940 to 43665344 18299404 QTL B.burgdorferi-associated arthritis 28
Bbaa8 17 42740294 to 43665344 925050 QTL B.burgdorferi-associated arthritis 8
Pla2g7 17 43568098 to 43612201 44103 + protein coding gene phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
Tssr144713 17 43611264 to 43611311 47 + TSS region transcription start site region 144713
Tssr144714 17 43611341 to 43611396 55 + TSS region transcription start site region 144714
Tssr144715 17 43611877 to 43611950 73 + TSS region transcription start site region 144715
Tssr148139 17 43612027 to 43612056 29 - TSS region transcription start site region 148139
Tssr148140 17 43612085 to 43612106 21 - TSS region transcription start site region 148140
Tssr148141 17 43612133 to 43612157 24 - TSS region transcription start site region 148141
Tssr148142 17 43612182 to 43612203 21 - TSS region transcription start site region 148142
Tdrd6 17 43615335 to 43630299 14964 - protein coding gene tudor domain containing 6
Tssr148143 17 43624408 to 43624418 10 - TSS region transcription start site region 148143
Tssr148144 17 43628571 to 43628579 8 - TSS region transcription start site region 148144
Tssr148145 17 43628605 to 43628613 8 - TSS region transcription start site region 148145
Cpgi9172 17 43628995 to 43630580 1585 CpG island CpG island 9172
Tssr148146 17 43630280 to 43630289 9 - TSS region transcription start site region 148146
Tssr148147 17 43630290 to 43630304 14 - TSS region transcription start site region 148147
Tssr148148 17 43630310 to 43630313 3 - TSS region transcription start site region 148148
Tssr5122 17 43630628 to 43630651 23 - TSS region transcription start site region 5122
Tssr148149 17 43630686 to 43630697 11 - TSS region transcription start site region 148149
Slc25a27 17 43641891 to 43667214 25323 - protein coding gene solute carrier family 25, member 27
Tssr148150 17 43649687 to 43649695 8 - TSS region transcription start site region 148150
Tssr148151 17 43649697 to 43649719 22 - TSS region transcription start site region 148151
D17Mit215 17 43665243 to 43665344 101 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 215
Cpgi9173 17 43666673 to 43667345 672 CpG island CpG island 9173
Tssr148152 17 43667139 to 43667163 24 - TSS region transcription start site region 148152
Tssr148153 17 43667165 to 43667198 33 - TSS region transcription start site region 148153
Tssr144716 17 43667389 to 43667393 4 + TSS region transcription start site region 144716
Cyp39a1 17 43667425 to 43751431 84006 + protein coding gene cytochrome P450, family 39, subfamily a, polypeptide 1
Tssr144717 17 43667488 to 43667512 24 + TSS region transcription start site region 144717
Tssr144718 17 43667513 to 43667537 24 + TSS region transcription start site region 144718
Gm25783 17 43698363 to 43698552 189 + snRNA gene predicted gene, 25783
Gm41581 17 43721473 to 43746516 25043 - lncRNA gene predicted gene, 41581
Tssr148154 17 43744558 to 43744569 11 - TSS region transcription start site region 148154
Tssr148155 17 43744577 to 43744595 18 - TSS region transcription start site region 148155
Gm34773 17 43787541 to 43800383 12842 - lncRNA gene predicted gene, 34773
Tssr144719 17 43801294 to 43801322 28 + TSS region transcription start site region 144719
Tssr144720 17 43801324 to 43801354 30 + TSS region transcription start site region 144720
Rcan2 17 43801351 to 44039516 238165 + protein coding gene regulator of calcineurin 2
Cpgi9174 17 43801519 to 43802553 1034 CpG island CpG island 9174
Tssr144721 17 43801788 to 43801817 29 + TSS region transcription start site region 144721
Tssr144722 17 43801823 to 43801863 40 + TSS region transcription start site region 144722
Tssr144723 17 43801870 to 43801882 12 + TSS region transcription start site region 144723
Tssr144724 17 43801891 to 43801899 8 + TSS region transcription start site region 144724
Tssr144725 17 43801913 to 43801924 11 + TSS region transcription start site region 144725
Tssr144726 17 43801927 to 43802011 84 + TSS region transcription start site region 144726
Tssr144727 17 43804021 to 43804041 20 + TSS region transcription start site region 144727
Tssr144728 17 43804044 to 43804088 44 + TSS region transcription start site region 144728
Tssr148156 17 43816439 to 43816460 21 - TSS region transcription start site region 148156