Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 17:35369850-35485055

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195 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prrc2a 17 35368052 to 35383873 15821 - protein coding gene proline-rich coiled-coil 2A
Tssr147767 17 35377011 to 35377023 12 - TSS region transcription start site region 147767
Tssr147768 17 35377415 to 35377431 16 - TSS region transcription start site region 147768
Tssr144257 17 35378022 to 35378073 51 + TSS region transcription start site region 144257
Tssr147769 17 35378129 to 35378174 45 - TSS region transcription start site region 147769
Tssr147770 17 35378369 to 35378386 17 - TSS region transcription start site region 147770
Tssr147771 17 35379771 to 35379811 40 - TSS region transcription start site region 147771
Tssr147772 17 35381289 to 35381313 24 - TSS region transcription start site region 147772
Gm23442 17 35381539 to 35381672 133 - snoRNA gene predicted gene, 23442
Tssr147773 17 35381980 to 35382016 36 - TSS region transcription start site region 147773
Cpgi9084 17 35383186 to 35384412 1226 CpG island CpG island 9084
Tssr147774 17 35383552 to 35383639 87 - TSS region transcription start site region 147774
Tssr147775 17 35383820 to 35383827 7 - TSS region transcription start site region 147775
Tssr147776 17 35383836 to 35383865 29 - TSS region transcription start site region 147776
Tssr147777 17 35383867 to 35383877 10 - TSS region transcription start site region 147777
Tssr147778 17 35383989 to 35384002 13 - TSS region transcription start site region 147778
Gm17705 17 35384095 to 35386162 2067 + lncRNA gene predicted gene, 17705
Tssr147779 17 35384104 to 35384113 9 - TSS region transcription start site region 147779
Tssr147780 17 35384116 to 35384129 13 - TSS region transcription start site region 147780
Tssr147781 17 35384130 to 35384136 6 - TSS region transcription start site region 147781
Tssr147782 17 35384354 to 35384378 24 - TSS region transcription start site region 147782
Tssr144258 17 35389963 to 35389973 10 + TSS region transcription start site region 144258
Aif1 17 35389967 to 35395044 5077 - protein coding gene allograft inflammatory factor 1
Tssr144259 17 35390510 to 35390524 14 + TSS region transcription start site region 144259
Tssr144260 17 35391101 to 35391137 36 + TSS region transcription start site region 144260
Tssr147783 17 35391553 to 35391575 22 - TSS region transcription start site region 147783
Tssr147784 17 35391584 to 35391614 30 - TSS region transcription start site region 147784
Tssr147785 17 35392388 to 35392406 18 - TSS region transcription start site region 147785
Tssr147786 17 35394971 to 35395014 43 - TSS region transcription start site region 147786
Tssr147787 17 35395024 to 35395031 7 - TSS region transcription start site region 147787
Tssr147788 17 35396429 to 35396432 3 - TSS region transcription start site region 147788
Ncr3-ps 17 35399511 to 35403638 4127 + pseudogene natural cytotoxicity triggering receptor 3, pseudogene
Lst1 17 35404071 to 35407415 3344 - protein coding gene leukocyte specific transcript 1
Tssr144261 17 35405838 to 35405888 50 + TSS region transcription start site region 144261
Tssr144262 17 35405910 to 35405950 40 + TSS region transcription start site region 144262
Tssr147789 17 35405941 to 35405982 41 - TSS region transcription start site region 147789
Tssr144263 17 35406932 to 35406940 8 + TSS region transcription start site region 144263
Tssr147790 17 35407403 to 35407422 19 - TSS region transcription start site region 147790
Tssr147791 17 35409210 to 35409234 24 - TSS region transcription start site region 147791
Tssr144264 17 35409332 to 35409353 21 + TSS region transcription start site region 144264
Cpgi9085 17 35412942 to 35413203 261 CpG island CpG island 9085
Tssr144265 17 35413118 to 35413131 13 + TSS region transcription start site region 144265
Tssr144266 17 35413300 to 35413315 15 + TSS region transcription start site region 144266
Tssr144267 17 35413381 to 35413397 16 + TSS region transcription start site region 144267
Tssr144268 17 35413478 to 35413497 19 + TSS region transcription start site region 144268
Ltb 17 35413483 to 35415281 1798 + protein coding gene lymphotoxin B
Tssr144269 17 35413573 to 35413578 5 + TSS region transcription start site region 144269
Tssr144270 17 35413867 to 35413885 18 + TSS region transcription start site region 144270
Tssr144271 17 35413886 to 35413899 13 + TSS region transcription start site region 144271
Mir6973a 17 35413948 to 35414025 77 + miRNA gene microRNA 6973a
Tssr144272 17 35413996 to 35414015 19 + TSS region transcription start site region 144272
Tssr144273 17 35414016 to 35414026 10 + TSS region transcription start site region 144273
Tssr144274 17 35414028 to 35414044 16 + TSS region transcription start site region 144274
Tssr144275 17 35414054 to 35414065 11 + TSS region transcription start site region 144275
Tssr144276 17 35414083 to 35414124 41 + TSS region transcription start site region 144276
Cpgi9086 17 35414287 to 35415443 1156 CpG island CpG island 9086
Tssr144277 17 35414508 to 35414521 13 + TSS region transcription start site region 144277
Tssr147792 17 35414692 to 35414702 10 - TSS region transcription start site region 147792
Tssr144278 17 35414841 to 35414873 32 + TSS region transcription start site region 144278
Tssr144279 17 35414947 to 35414954 7 + TSS region transcription start site region 144279
Tssr147793 17 35415149 to 35415176 27 - TSS region transcription start site region 147793
Tnf 17 35418357 to 35420983 2626 - protein coding gene tumor necrosis factor
Lbw1 17 35418357 to 35420983 2626 QTL lupus NZB x NZW 1
Tssr147794 17 35418367 to 35418381 14 - TSS region transcription start site region 147794
Tssr147795 17 35418387 to 35418409 22 - TSS region transcription start site region 147795
Tssr147796 17 35418648 to 35418651 3 - TSS region transcription start site region 147796
Tssr147797 17 35418731 to 35418742 11 - TSS region transcription start site region 147797
Tssr144280 17 35418922 to 35418931 9 + TSS region transcription start site region 144280
Tssr147798 17 35418997 to 35419009 12 - TSS region transcription start site region 147798
Tssr147799 17 35419079 to 35419091 12 - TSS region transcription start site region 147799
Tssr147800 17 35419100 to 35419114 14 - TSS region transcription start site region 147800
Tssr144281 17 35419259 to 35419280 21 + TSS region transcription start site region 144281
Tssr147801 17 35419263 to 35419275 12 - TSS region transcription start site region 147801
Tssr147802 17 35419289 to 35419309 20 - TSS region transcription start site region 147802
Tssr144282 17 35419299 to 35419305 6 + TSS region transcription start site region 144282
Tssr147803 17 35419315 to 35419334 19 - TSS region transcription start site region 147803
Tssr144283 17 35419315 to 35419328 13 + TSS region transcription start site region 144283
Tssr147804 17 35419341 to 35419354 13 - TSS region transcription start site region 147804
Tssr144284 17 35419347 to 35419368 21 + TSS region transcription start site region 144284
Tssr147805 17 35419364 to 35419375 11 - TSS region transcription start site region 147805
Tssr144285 17 35419370 to 35419379 9 + TSS region transcription start site region 144285
Tssr147806 17 35419389 to 35419398 9 - TSS region transcription start site region 147806
Tssr144286 17 35419394 to 35419406 12 + TSS region transcription start site region 144286
Tssr144287 17 35419408 to 35419455 47 + TSS region transcription start site region 144287
Tssr147807 17 35419419 to 35419431 12 - TSS region transcription start site region 147807
Tssr147808 17 35419447 to 35419462 15 - TSS region transcription start site region 147808
Tssr147809 17 35419497 to 35419504 7 - TSS region transcription start site region 147809
Tssr144288 17 35419502 to 35419519 17 + TSS region transcription start site region 144288
Tssr147810 17 35419514 to 35419520 6 - TSS region transcription start site region 147810
Tssr147811 17 35419540 to 35419549 9 - TSS region transcription start site region 147811
Tssr144289 17 35419695 to 35419703 8 + TSS region transcription start site region 144289
Tssr144290 17 35419711 to 35419722 11 + TSS region transcription start site region 144290
Tssr144291 17 35419727 to 35419734 7 + TSS region transcription start site region 144291
Tssr144292 17 35419827 to 35419848 21 + TSS region transcription start site region 144292
Tssr147812 17 35419899 to 35419911 12 - TSS region transcription start site region 147812
Tssr147813 17 35420111 to 35420123 12 - TSS region transcription start site region 147813
Tssr147814 17 35420972 to 35420990 18 - TSS region transcription start site region 147814
Tssr144293 17 35421657 to 35421672 15 + TSS region transcription start site region 144293
Pas2 17 35422141 to 35424327 2186 QTL pulmonary adenoma susceptibility 2
Lta 17 35422141 to 35424327 2186 - protein coding gene lymphotoxin A
Mir6974 17 35423451 to 35423533 82 - miRNA gene microRNA 6974
Tssr147815 17 35423622 to 35423630 8 - TSS region transcription start site region 147815
Tssr147816 17 35423641 to 35423661 20 - TSS region transcription start site region 147816
D17Nds3 17 35423835 to 35423974 139 DNA segment DNA segment, Chr 17, Nuffield Department of Surgery 3
Tssr147817 17 35424141 to 35424199 58 - TSS region transcription start site region 147817
Tssr147818 17 35424281 to 35424293 12 - TSS region transcription start site region 147818
Tssr147819 17 35424459 to 35424486 27 - TSS region transcription start site region 147819
Tssr144294 17 35429428 to 35429439 11 + TSS region transcription start site region 144294
Tssr144295 17 35429444 to 35429485 41 + TSS region transcription start site region 144295
Tssr147820 17 35438562 to 35438569 7 - TSS region transcription start site region 147820
Tssr147821 17 35438572 to 35438587 15 - TSS region transcription start site region 147821
Dp(17Nfkbil1-Olfr91)1Cogr 17 35439151 to 37409170 1970019 chromosomal duplication duplication, Chr 17, Cornelius Gross 1
Nfkbil1 17 35439151 to 35454768 15617 - protein coding gene nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1
Tssr144296 17 35439260 to 35439267 7 + TSS region transcription start site region 144296
Tssr144297 17 35439272 to 35439293 21 + TSS region transcription start site region 144297
Cpgi9087 17 35439461 to 35439946 485 CpG island CpG island 9087
Gm16181 17 35439810 to 35443110 3300 + protein coding gene predicted gene 16181
Tssr144298 17 35451981 to 35451990 9 + TSS region transcription start site region 144298
Cpgi9088 17 35453827 to 35454355 528 CpG island CpG island 9088
Atp6v1g2 17 35453910 to 35457743 3833 + protein coding gene ATPase, H+ transporting, lysosomal V1 subunit G2
Tssr147822 17 35453972 to 35454010 38 - TSS region transcription start site region 147822
Tssr144299 17 35454063 to 35454087 24 + TSS region transcription start site region 144299
Tssr147823 17 35454191 to 35454236 45 - TSS region transcription start site region 147823
Tssr147824 17 35454669 to 35454685 16 - TSS region transcription start site region 147824
Cpgi9089 17 35454705 to 35455043 338 CpG island CpG island 9089
Tssr147825 17 35454711 to 35454718 7 - TSS region transcription start site region 147825
Tssr147826 17 35454731 to 35454793 62 - TSS region transcription start site region 147826
Tssr144300 17 35454833 to 35454866 33 + TSS region transcription start site region 144300
Tssr144301 17 35454873 to 35454889 16 + TSS region transcription start site region 144301
Cpgi9090 17 35455312 to 35455821 509 CpG island CpG island 9090
Tssr147827 17 35455470 to 35455507 37 - TSS region transcription start site region 147827
Tssr144302 17 35455532 to 35455583 51 + TSS region transcription start site region 144302
Tssr144303 17 35455584 to 35455593 9 + TSS region transcription start site region 144303
Tssr144304 17 35455626 to 35455644 18 + TSS region transcription start site region 144304
Tssr144305 17 35455646 to 35455655 9 + TSS region transcription start site region 144305
Tssr5102 17 35455660 to 35455669 9 + TSS region transcription start site region 5102
Tssr144306 17 35455671 to 35455735 64 + TSS region transcription start site region 144306
Tssr144307 17 35456649 to 35456669 20 + TSS region transcription start site region 144307
Tssr144308 17 35456735 to 35456753 18 + TSS region transcription start site region 144308
Tssr144309 17 35456786 to 35456798 12 + TSS region transcription start site region 144309
Tssr144310 17 35456871 to 35456894 23 + TSS region transcription start site region 144310
Tssr144311 17 35456899 to 35456910 11 + TSS region transcription start site region 144311
Tssr144312 17 35456941 to 35456957 16 + TSS region transcription start site region 144312
Tssr144313 17 35456961 to 35456986 25 + TSS region transcription start site region 144313
Tssr144314 17 35457143 to 35457157 14 + TSS region transcription start site region 144314
Tssr144315 17 35457318 to 35457347 29 + TSS region transcription start site region 144315
Tssr144316 17 35457354 to 35457380 26 + TSS region transcription start site region 144316
Cpgi9091 17 35460318 to 35462404 2086 CpG island CpG island 9091
Ddx39b 17 35460722 to 35472683 11961 + protein coding gene DEAD box helicase 39b
Tssr144317 17 35460742 to 35460750 8 + TSS region transcription start site region 144317
Tssr144318 17 35460761 to 35460813 52 + TSS region transcription start site region 144318
Tssr144319 17 35460814 to 35460830 16 + TSS region transcription start site region 144319
Tssr144320 17 35461144 to 35461174 30 + TSS region transcription start site region 144320
Tssr144321 17 35461319 to 35461331 12 + TSS region transcription start site region 144321
Gm22589 17 35461654 to 35461730 76 + snoRNA gene predicted gene, 22589
Tssr147828 17 35461678 to 35461684 6 - TSS region transcription start site region 147828
Tssr144322 17 35461844 to 35461856 12 + TSS region transcription start site region 144322
Tssr144323 17 35461971 to 35461993 22 + TSS region transcription start site region 144323
Tssr144324 17 35462034 to 35462045 11 + TSS region transcription start site region 144324
Tssr144325 17 35462069 to 35462126 57 + TSS region transcription start site region 144325
Tssr144326 17 35462128 to 35462152 24 + TSS region transcription start site region 144326
Tssr144327 17 35462181 to 35462203 22 + TSS region transcription start site region 144327
Mir6975 17 35463051 to 35463111 60 + miRNA gene microRNA 6975
Tssr144328 17 35465979 to 35466009 30 + TSS region transcription start site region 144328
Tssr144329 17 35466150 to 35466153 3 + TSS region transcription start site region 144329
Gm25128 17 35466151 to 35466226 75 + snoRNA gene predicted gene, 25128
Tssr144330 17 35467942 to 35467967 25 + TSS region transcription start site region 144330
Tssr144331 17 35468057 to 35468105 48 + TSS region transcription start site region 144331
Tssr144332 17 35470190 to 35470213 23 + TSS region transcription start site region 144332
Mir8094 17 35470265 to 35470381 116 + miRNA gene microRNA 8094
Tssr5103 17 35472508 to 35472569 61 + TSS region transcription start site region 5103
Tssr147829 17 35477065 to 35477079 14 - TSS region transcription start site region 147829
Tssr147830 17 35477244 to 35477267 23 - TSS region transcription start site region 147830
Tssr144333 17 35478322 to 35478335 13 + TSS region transcription start site region 144333
5430410E06Rik 17 35481245 to 35482580 1335 - lncRNA gene RIKEN cDNA 5430410E06 gene
Tssr144334 17 35481702 to 35481752 50 + TSS region transcription start site region 144334
Cpgi9092 17 35481738 to 35483232 1494 CpG island CpG island 9092
Tssr144335 17 35481778 to 35481799 21 + TSS region transcription start site region 144335
Tssr147831 17 35481821 to 35481830 9 - TSS region transcription start site region 147831
Tssr144336 17 35482039 to 35482050 11 + TSS region transcription start site region 144336
Tssr144337 17 35482063 to 35482076 13 + TSS region transcription start site region 144337
H2-D1 17 35482070 to 35486473 4403 + protein coding gene histocompatibility 2, D region locus 1
Tssr144338 17 35482267 to 35482286 19 + TSS region transcription start site region 144338
Tssr144339 17 35482401 to 35482433 32 + TSS region transcription start site region 144339
Tssr147832 17 35482567 to 35482594 27 - TSS region transcription start site region 147832
Tssr144340 17 35482735 to 35482744 9 + TSS region transcription start site region 144340
Tssr144341 17 35482840 to 35482861 21 + TSS region transcription start site region 144341
Tssr144342 17 35482937 to 35482966 29 + TSS region transcription start site region 144342
Tssr144343 17 35483022 to 35483034 12 + TSS region transcription start site region 144343
Tssr147833 17 35483044 to 35483080 36 - TSS region transcription start site region 147833
Tssr144344 17 35483373 to 35483394 21 + TSS region transcription start site region 144344
Tssr144345 17 35483752 to 35483763 11 + TSS region transcription start site region 144345
Tssr144346 17 35483812 to 35483826 14 + TSS region transcription start site region 144346
Tssr144347 17 35483867 to 35483871 4 + TSS region transcription start site region 144347
Tssr144348 17 35484766 to 35484788 22 + TSS region transcription start site region 144348