Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:27349701-27520523

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49795 17 27353861 to 27354668 807 - lincRNA gene predicted gene, 49795
Gm49794 17 27354111 to 27367492 13381 + lincRNA gene predicted gene, 49794
Tssr5051 17 27354800 to 27354803 3 + TSS region transcription start site region 5051
Mir7217 17 27355738 to 27355799 61 + miRNA gene microRNA 7217
Mir7218 17 27358097 to 27358155 58 + miRNA gene microRNA 7218
Tssr147021 17 27364470 to 27364487 17 - TSS region transcription start site region 147021
Gm35007 17 27397020 to 27398874 1854 - lncRNA gene predicted gene, 35007
Tssr143320 17 27398135 to 27398183 48 + TSS region transcription start site region 143320
Gm49796 17 27398147 to 27399221 1074 + lincRNA gene predicted gene, 49796
Tssr143321 17 27398212 to 27398215 3 + TSS region transcription start site region 143321
Grm4 17 27422387 to 27513678 91291 - protein coding gene glutamate receptor, metabotropic 4
Tssr147022 17 27426228 to 27426261 33 - TSS region transcription start site region 147022
Tssr147023 17 27426330 to 27426337 7 - TSS region transcription start site region 147023
Tssr147024 17 27426467 to 27426478 11 - TSS region transcription start site region 147024
Tssr147025 17 27426501 to 27426512 11 - TSS region transcription start site region 147025
Tssr147026 17 27431415 to 27431458 43 - TSS region transcription start site region 147026
Cpgi8840 17 27434701 to 27435523 822 CpG island CpG island 8840
Tssr147027 17 27436717 to 27436722 5 - TSS region transcription start site region 147027
Tssr147028 17 27436754 to 27436767 13 - TSS region transcription start site region 147028
Tssr147029 17 27436868 to 27436877 9 - TSS region transcription start site region 147029
Tssr147030 17 27436942 to 27436960 18 - TSS region transcription start site region 147030
Tssr147031 17 27436998 to 27437008 10 - TSS region transcription start site region 147031
Tssr147032 17 27437031 to 27437039 8 - TSS region transcription start site region 147032
Tssr147033 17 27437080 to 27437093 13 - TSS region transcription start site region 147033
Gm49789 17 27437529 to 27438027 498 + unclassified gene predicted gene, 49789
Tssr5052 17 27444941 to 27444975 34 - TSS region transcription start site region 5052
Tssr147034 17 27445158 to 27445207 49 - TSS region transcription start site region 147034
Tssr147035 17 27467513 to 27467524 11 - TSS region transcription start site region 147035
Tssr147036 17 27467782 to 27467792 10 - TSS region transcription start site region 147036
Tssr147037 17 27467799 to 27467824 25 - TSS region transcription start site region 147037
Tssr147038 17 27467872 to 27467892 20 - TSS region transcription start site region 147038
Gm49790 17 27468492 to 27468889 397 - unclassified gene predicted gene, 49790
Tssr147039 17 27486755 to 27486760 5 - TSS region transcription start site region 147039
D17Mit30 17 27496818 to 27496965 147 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 30
Modc1 17 27496818 to 45311728 17814910 QTL modifier of Odc1
Lmr7 17 27496965 to 4804477 -22692488 QTL leishmaniasis resistance 7
Cpgi8841 17 27502650 to 27503062 412 CpG island CpG island 8841
Cpgi8842 17 27511525 to 27514176 2651 CpG island CpG island 8842
Tssr147040 17 27513378 to 27513383 5 - TSS region transcription start site region 147040
Tssr147041 17 27513387 to 27513405 18 - TSS region transcription start site region 147041