Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:24663294-24733345

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr143057 17 24665982 to 24665996 14 + TSS region transcription start site region 143057
Cpgi8735 17 24669301 to 24670497 1196 CpG island CpG island 8735
Tssr143058 17 24669684 to 24669727 43 + TSS region transcription start site region 143058
Zfp598 17 24669693 to 24682016 12323 + protein coding gene zinc finger protein 598
Tssr143059 17 24669730 to 24669752 22 + TSS region transcription start site region 143059
Tssr146761 17 24670675 to 24670705 30 - TSS region transcription start site region 146761
Syngr3 17 24685092 to 24689949 4857 - protein coding gene synaptogyrin 3
Cpgi8736 17 24686391 to 24686807 416 CpG island CpG island 8736
Cpgi8737 17 24687316 to 24687871 555 CpG island CpG island 8737
Cpgi8738 17 24689505 to 24690239 734 CpG island CpG island 8738
Tssr146762 17 24689880 to 24689887 7 - TSS region transcription start site region 146762
Tssr146763 17 24689901 to 24689960 59 - TSS region transcription start site region 146763
Gfer 17 24693187 to 24696156 2969 - protein coding gene growth factor, augmenter of liver regeneration
Cpgi8739 17 24695604 to 24696747 1143 CpG island CpG island 8739
Tssr146764 17 24695987 to 24695996 9 - TSS region transcription start site region 146764
Tssr146765 17 24696065 to 24696108 43 - TSS region transcription start site region 146765
Tssr146766 17 24696121 to 24696136 15 - TSS region transcription start site region 146766
Tssr146767 17 24696147 to 24696166 19 - TSS region transcription start site region 146767
Tssr146768 17 24696197 to 24696206 9 - TSS region transcription start site region 146768
Noxo1 17 24696234 to 24700529 4295 + protein coding gene NADPH oxidase organizer 1
Tssr143060 17 24696276 to 24696320 44 + TSS region transcription start site region 143060
Tssr146769 17 24696505 to 24696536 31 - TSS region transcription start site region 146769
Tssr146770 17 24696541 to 24696553 12 - TSS region transcription start site region 146770
Tssr5034 17 24696556 to 24696565 9 - TSS region transcription start site region 5034
Tssr146771 17 24696569 to 24696585 16 - TSS region transcription start site region 146771
Tssr143061 17 24696660 to 24696664 4 + TSS region transcription start site region 143061
Tssr143062 17 24698220 to 24698252 32 + TSS region transcription start site region 143062
Tssr143063 17 24698294 to 24698345 51 + TSS region transcription start site region 143063
Tssr143064 17 24698349 to 24698371 22 + TSS region transcription start site region 143064
Tssr5035 17 24699799 to 24699807 8 + TSS region transcription start site region 5035
Tssr143065 17 24699903 to 24699905 2 + TSS region transcription start site region 143065
Tbl3 17 24700653 to 24707653 7000 - protein coding gene transducin (beta)-like 3
Cpgi8740 17 24707412 to 24707906 494 CpG island CpG island 8740
Tssr146772 17 24707607 to 24707610 3 - TSS region transcription start site region 146772
Tssr146773 17 24707617 to 24707661 44 - TSS region transcription start site region 146773
Rnf151 17 24715839 to 24718057 2218 - protein coding gene ring finger protein 151
Tssr146774 17 24718006 to 24718018 12 - TSS region transcription start site region 146774
Tssr146775 17 24718051 to 24718062 11 - TSS region transcription start site region 146775
Tssr143066 17 24718088 to 24718118 30 + TSS region transcription start site region 143066
Cpgi8741 17 24719520 to 24720535 1015 CpG island CpG island 8741
Snhg9 17 24719531 to 24719965 434 - antisense lncRNA gene small nucleolar RNA host gene 9
Snora78 17 24719676 to 24719803 127 - snoRNA gene small nucleolar RNA, H/ACA box 7
Tssr146776 17 24719889 to 24719916 27 - TSS region transcription start site region 146776
Tssr146777 17 24719918 to 24719929 11 - TSS region transcription start site region 146777
Tssr143067 17 24719953 to 24719956 3 + TSS region transcription start site region 143067
Tssr146778 17 24719959 to 24719970 11 - TSS region transcription start site region 146778
Tssr143068 17 24720043 to 24720057 14 + TSS region transcription start site region 143068
Rps2 17 24720063 to 24721927 1864 + protein coding gene ribosomal protein S2
Tssr143069 17 24720067 to 24720083 16 + TSS region transcription start site region 143069
Tssr143070 17 24720102 to 24720118 16 + TSS region transcription start site region 143070
Tssr143071 17 24720181 to 24720189 8 + TSS region transcription start site region 143071
Tssr143072 17 24720251 to 24720262 11 + TSS region transcription start site region 143072
Snora64 17 24720789 to 24720905 116 + snoRNA gene small nucleolar RNA, H/ACA box 64
Ndufb10 17 24722067 to 24724388 2321 - protein coding gene NADH:ubiquinone oxidoreductase subunit B10
Cpgi8742 17 24723854 to 24724717 863 CpG island CpG island 8742
Tssr146779 17 24724333 to 24724344 11 - TSS region transcription start site region 146779
Tssr146780 17 24724374 to 24724455 81 - TSS region transcription start site region 146780
Tssr143073 17 24727819 to 24727839 20 + TSS region transcription start site region 143073
Rpl3l 17 24727829 to 24736149 8320 + protein coding gene ribosomal protein L3-like
Tssr143074 17 24727848 to 24727863 15 + TSS region transcription start site region 143074
Tssr143075 17 24728244 to 24728247 3 + TSS region transcription start site region 143075
Tssr143076 17 24728249 to 24728259 10 + TSS region transcription start site region 143076
Tssr143077 17 24728363 to 24728381 18 + TSS region transcription start site region 143077
Tssr143078 17 24730888 to 24730903 15 + TSS region transcription start site region 143078