Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:12606115-13006147

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132 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
tclLub2 17 12378609 to 12675838 297229 heritable phenotypic marker t-complex lethal Lub2
Slc22a2 17 12584132 to 12628488 44356 + protein coding gene solute carrier family 22 (organic cation transporter), member 2
Tssr142621 17 12614707 to 12614716 9 + TSS region transcription start site region 142621
Tssr142622 17 12614749 to 12614755 6 + TSS region transcription start site region 142622
Tssr142623 17 12615283 to 12615290 7 + TSS region transcription start site region 142623
Slc22a1 17 12648869 to 12675829 26960 - protein coding gene solute carrier family 22 (organic cation transporter), member 1
Tssr146430 17 12652641 to 12652652 11 - TSS region transcription start site region 146430
Tssr146431 17 12652670 to 12652679 9 - TSS region transcription start site region 146431
Tssr146432 17 12652739 to 12652753 14 - TSS region transcription start site region 146432
Tssr146433 17 12674803 to 12674807 4 - TSS region transcription start site region 146433
Tssr146434 17 12675698 to 12675714 16 - TSS region transcription start site region 146434
Tssr146435 17 12675728 to 12675739 11 - TSS region transcription start site region 146435
Tssr146436 17 12675742 to 12675775 33 - TSS region transcription start site region 146436
Tssr146437 17 12675786 to 12675807 21 - TSS region transcription start site region 146437
Tssr146438 17 12675833 to 12675844 11 - TSS region transcription start site region 146438
D17Jcs63 17 12677353 to 12677526 173 DNA segment DNA segment, Chr 17, John C. Schimenti 63
Igf2r 17 12682406 to 12769664 87258 - protein coding gene insulin-like growth factor 2 receptor
Tssr146439 17 12682815 to 12682820 5 - TSS region transcription start site region 146439
Tssr146440 17 12688558 to 12688565 7 - TSS region transcription start site region 146440
Tssr146441 17 12688769 to 12688774 5 - TSS region transcription start site region 146441
Tssr146442 17 12691981 to 12691986 5 - TSS region transcription start site region 146442
Tssr146443 17 12691996 to 12692012 16 - TSS region transcription start site region 146443
Tssr146444 17 12692018 to 12692021 3 - TSS region transcription start site region 146444
Tssr146445 17 12692036 to 12692044 8 - TSS region transcription start site region 146445
Tssr146446 17 12692047 to 12692067 20 - TSS region transcription start site region 146446
Tssr146447 17 12716019 to 12716031 12 - TSS region transcription start site region 146447
Tssr146448 17 12725397 to 12725421 24 - TSS region transcription start site region 146448
Tssr146449 17 12740578 to 12740608 30 - TSS region transcription start site region 146449
Airn 17 12741311 to 12859884 118573 + antisense lncRNA gene antisense Igf2r RNA
Tssr142624 17 12741339 to 12741350 11 + TSS region transcription start site region 142624
Tssr142625 17 12741360 to 12741384 24 + TSS region transcription start site region 142625
Cpgi8613 17 12741360 to 12742660 1300 CpG island CpG island 8613
Tssr142626 17 12741385 to 12741399 14 + TSS region transcription start site region 142626
Tssr142627 17 12744692 to 12744700 8 + TSS region transcription start site region 142627
Tssr142628 17 12745851 to 12745887 36 + TSS region transcription start site region 142628
Tssr142629 17 12746488 to 12746500 12 + TSS region transcription start site region 142629
Tssr142630 17 12746531 to 12746543 12 + TSS region transcription start site region 142630
Tssr142631 17 12746671 to 12746684 13 + TSS region transcription start site region 142631
Tssr142632 17 12748375 to 12748379 4 + TSS region transcription start site region 142632
Tssr142633 17 12754813 to 12754827 14 + TSS region transcription start site region 142633
Tssr142634 17 12755434 to 12755456 22 + TSS region transcription start site region 142634
Tssr142635 17 12756018 to 12756032 14 + TSS region transcription start site region 142635
Tssr142636 17 12759189 to 12759201 12 + TSS region transcription start site region 142636
Tssr142637 17 12760178 to 12760183 5 + TSS region transcription start site region 142637
Tssr142638 17 12762929 to 12762935 6 + TSS region transcription start site region 142638
Tssr146450 17 12764013 to 12764016 3 - TSS region transcription start site region 146450
Tssr142639 17 12765349 to 12765375 26 + TSS region transcription start site region 142639
Cpgi8614 17 12769019 to 12770184 1165 CpG island CpG island 8614
Tssr146451 17 12769605 to 12769700 95 - TSS region transcription start site region 146451
Tssr146452 17 12769702 to 12769727 25 - TSS region transcription start site region 146452
Gm23833 17 12770631 to 12770882 251 + unclassified non-coding RNA gene predicted gene, 23833
Tssr142640 17 12775217 to 12775228 11 + TSS region transcription start site region 142640
Tssr142641 17 12775241 to 12775252 11 + TSS region transcription start site region 142641
Gm49959 17 12784882 to 12791660 6778 - lincRNA gene predicted gene, 49959
Tssr142642 17 12788311 to 12788326 15 + TSS region transcription start site region 142642
Tssr142643 17 12789175 to 12789186 11 + TSS region transcription start site region 142643
Tssr142644 17 12791093 to 12791097 4 + TSS region transcription start site region 142644
Tssr142645 17 12792885 to 12792906 21 + TSS region transcription start site region 142645
Tssr142646 17 12793341 to 12793344 3 + TSS region transcription start site region 142646
Tssr142647 17 12793935 to 12793938 3 + TSS region transcription start site region 142647
Gm49958 17 12795746 to 12800795 5049 - lincRNA gene predicted gene, 49958
D17Jcs62 17 12795884 to 12796085 201 DNA segment DNA segment, Chr 17, John C. Schimenti 62
Tssr142648 17 12798595 to 12798609 14 + TSS region transcription start site region 142648
Tssr142649 17 12798974 to 12799004 30 + TSS region transcription start site region 142649
Tssr142650 17 12799144 to 12799162 18 + TSS region transcription start site region 142650
Tssr142651 17 12805627 to 12805652 25 + TSS region transcription start site region 142651
Tssr142652 17 12806115 to 12806147 32 + TSS region transcription start site region 142652
Tssr142653 17 12807166 to 12807204 38 + TSS region transcription start site region 142653
Tssr142654 17 12810542 to 12810564 22 + TSS region transcription start site region 142654
Gm16574 17 12818793 to 12819537 744 + pseudogene predicted gene 16574
Gm7162 17 12819819 to 12820842 1023 - pseudogene predicted gene 7162
Tssr142655 17 12821537 to 12821555 18 + TSS region transcription start site region 142655
Tssr142656 17 12822085 to 12822088 3 + TSS region transcription start site region 142656
Tssr142657 17 12823403 to 12823417 14 + TSS region transcription start site region 142657
Gm17592 17 12837815 to 12838158 343 - pseudogene predicted gene, 17592
Mas1 17 12841079 to 12868143 27064 - protein coding gene MAS1 oncogene
Tssr146453 17 12851895 to 12851916 21 - TSS region transcription start site region 146453
Tssr142658 17 12859060 to 12859069 9 + TSS region transcription start site region 142658
Gm24085 17 12865125 to 12865240 115 - miRNA gene predicted gene, 24085
Tssr142659 17 12867024 to 12867037 13 + TSS region transcription start site region 142659
D17Jcs61 17 12867515 to 12867938 423 DNA segment DNA segment, Chr 17, John C. Schimenti 61
Tssr146454 17 12868126 to 12868148 22 - TSS region transcription start site region 146454
Mrgprh 17 12876034 to 12877842 1808 + protein coding gene MAS-related GPR, member H
Tssr142660 17 12878665 to 12878668 3 + TSS region transcription start site region 142660
Cpgi8615 17 12879963 to 12880381 418 CpG island CpG island 8615
Pnldc1 17 12888729 to 12910230 21501 - protein coding gene poly(A)-specific ribonuclease (PARN)-like domain containing 1
Tssr146455 17 12895572 to 12895579 7 - TSS region transcription start site region 146455
Tssr146456 17 12895593 to 12895609 16 - TSS region transcription start site region 146456
Gm49926 17 12897537 to 12899705 2168 + antisense lncRNA gene predicted gene, 49926
Cpgi8616 17 12909748 to 12910107 359 CpG island CpG island 8616
Tssr146457 17 12909871 to 12909877 6 - TSS region transcription start site region 146457
Tssr146458 17 12909881 to 12909897 16 - TSS region transcription start site region 146458
Tssr146459 17 12909912 to 12909954 42 - TSS region transcription start site region 146459
Tssr142661 17 12909963 to 12910012 49 + TSS region transcription start site region 142661
Mrpl18 17 12911349 to 12916345 4996 - protein coding gene mitochondrial ribosomal protein L18
Cpgi8617 17 12915541 to 12917017 1476 CpG island CpG island 8617
Tssr146460 17 12915635 to 12915656 21 - TSS region transcription start site region 146460
Tssr146461 17 12916002 to 12916044 42 - TSS region transcription start site region 146461
Tssr146462 17 12916091 to 12916119 28 - TSS region transcription start site region 146462
Tcp1 17 12916329 to 12925067 8738 + protein coding gene t-complex protein 1
Tssr142662 17 12916385 to 12916403 18 + TSS region transcription start site region 142662
Tssr146463 17 12916389 to 12916408 19 - TSS region transcription start site region 146463
Tssr142663 17 12916426 to 12916447 21 + TSS region transcription start site region 142663
Tssr142664 17 12916457 to 12916475 18 + TSS region transcription start site region 142664
Tssr142665 17 12916494 to 12916515 21 + TSS region transcription start site region 142665
Tssr146464 17 12916791 to 12916831 40 - TSS region transcription start site region 146464
Tssr142666 17 12917272 to 12917276 4 + TSS region transcription start site region 142666
Tssr142667 17 12918084 to 12918101 17 + TSS region transcription start site region 142667
Gm26130 17 12919585 to 12919722 137 + snoRNA gene predicted gene, 26130
Snora20 17 12922857 to 12922917 60 + snoRNA gene small nucleolar RNA, H/ACA box 20
Acat3 17 12923959 to 12940396 16437 - protein coding gene acetyl-Coenzyme A acetyltransferase 3
Gm20591 17 12936170 to 12943675 7505 + pseudogene predicted gene, 20591
Cpgi8618 17 12940088 to 12940392 304 CpG island CpG island 8618
Tssr146465 17 12940317 to 12940370 53 - TSS region transcription start site region 146465
Acat2 17 12943042 to 12960725 17683 - protein coding gene acetyl-Coenzyme A acetyltransferase 2
Cpgi8619 17 12960185 to 12961056 871 CpG island CpG island 8619
Tssr146466 17 12960306 to 12960386 80 - TSS region transcription start site region 146466
Tssr146467 17 12960701 to 12960723 22 - TSS region transcription start site region 146467
Tssr146468 17 12960729 to 12960738 9 - TSS region transcription start site region 146468
Gm15946 17 12962768 to 12963190 422 + pseudogene predicted gene 15946
Wtap 17 12966799 to 12992624 25825 - protein coding gene Wilms tumour 1-associating protein
Tssr142668 17 12990999 to 12991012 13 + TSS region transcription start site region 142668
Tssr146469 17 12991545 to 12991548 3 - TSS region transcription start site region 146469
Cpgi8620 17 12991703 to 12993021 1318 CpG island CpG island 8620
Tssr142669 17 12991850 to 12991900 50 + TSS region transcription start site region 142669
Tssr146470 17 12992172 to 12992186 14 - TSS region transcription start site region 146470
Tssr146471 17 12992188 to 12992226 38 - TSS region transcription start site region 146471
Tssr146472 17 12992227 to 12992249 22 - TSS region transcription start site region 146472
Tssr146473 17 12992487 to 12992554 67 - TSS region transcription start site region 146473
Tssr146474 17 12992585 to 12992598 13 - TSS region transcription start site region 146474
Tssr146475 17 12992603 to 12992648 45 - TSS region transcription start site region 146475
Tssr146476 17 12994167 to 12994171 4 - TSS region transcription start site region 146476