Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:97805209-97975795

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
repro33 16 32312022 to 97830295 65518273 heritable phenotypic marker reproductive mutant 33, JAX Reproductive Mutagenesis Program
Prdm15 16 97791467 to 97851850 60383 - protein coding gene PR domain containing 15
D16Mit106 16 97830150 to 97830295 145 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 106
D16Jhu80 16 97848600 to 97848927 327 DNA segment DNA segment, Chr 16, Johns Hopkins University 80
Cpgi8535 16 97850839 to 97852133 1294 CpG island CpG island 8535
Tssr142334 16 97851775 to 97851788 13 - TSS region transcription start site region 142334
Tssr142335 16 97851796 to 97851853 57 - TSS region transcription start site region 142335
C2cd2 16 97855209 to 97922651 67442 - protein coding gene C2 calcium-dependent domain containing 2
Mir6964 16 97877233 to 97877291 58 - miRNA gene microRNA 6964
Cpgi8536 16 97921833 to 97923034 1201 CpG island CpG island 8536
Tssr142336 16 97922554 to 97922580 26 - TSS region transcription start site region 142336
Tssr142337 16 97922582 to 97922613 31 - TSS region transcription start site region 142337
D16Jhu81 16 97930575 to 97930754 179 DNA segment DNA segment, Chr 16, Johns Hopkins University 81
Gm41514 16 97936231 to 97939391 3160 - lncRNA gene predicted gene, 41514
Zbtb21 16 97945793 to 97962623 16830 - protein coding gene zinc finger and BTB domain containing 21
Tssr4979 16 97948672 to 97948689 17 - TSS region transcription start site region 4979
Cpgi8537 16 97961623 to 97962975 1352 CpG island CpG island 8537
Tssr142338 16 97962186 to 97962198 12 - TSS region transcription start site region 142338
Tssr142339 16 97962205 to 97962276 71 - TSS region transcription start site region 142339
Tssr142340 16 97962581 to 97962636 55 - TSS region transcription start site region 142340
Tssr142341 16 97965203 to 97965207 4 - TSS region transcription start site region 142341