Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:93879483-93979505

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
2610034B04Rik 16 93882994 to 93884460 1466 unclassified gene RIKEN cDNA 2610034B04 gene
Cpgi8489 16 93883450 to 93884721 1271 CpG island CpG island 8489
Tssr139529 16 93883895 to 93883954 59 + TSS region transcription start site region 139529
Chaf1b 16 93883901 to 93906115 22214 + protein coding gene chromatin assembly factor 1, subunit B (p60)
Tssr139530 16 93883958 to 93883974 16 + TSS region transcription start site region 139530
Gm49617 16 93888734 to 93890147 1413 + sense intronic lncRNA gene predicted gene, 49617
Tssr142208 16 93912203 to 93912216 13 - TSS region transcription start site region 142208
Tssr139531 16 93912359 to 93912403 44 + TSS region transcription start site region 139531
Tssr142209 16 93914334 to 93914357 23 - TSS region transcription start site region 142209
Cldn14 16 93919031 to 94008837 89806 - protein coding gene claudin 14
Cpgi8490 16 93919205 to 93919874 669 CpG island CpG island 8490
Tssr139532 16 93929361 to 93929367 6 + TSS region transcription start site region 139532
Tssr142210 16 93929464 to 93929475 11 - TSS region transcription start site region 142210
Tssr142211 16 93929483 to 93929505 22 - TSS region transcription start site region 142211
Tssr142212 16 93929512 to 93929528 16 - TSS region transcription start site region 142212
Gm31012 16 93929656 to 93957722 28066 + lncRNA gene predicted gene, 31012
Cpgi8491 16 93934209 to 93934481 272 CpG island CpG island 8491
Tssr139533 16 93957799 to 93957802 3 + TSS region transcription start site region 139533
D16Jhu33 16 93965038 to 93965281 243 DNA segment DNA segment, Chr 16, Johns Hopkins University 33
Tssr142213 16 93971080 to 93971092 12 - TSS region transcription start site region 142213
Tssr142214 16 93971112 to 93971118 6 - TSS region transcription start site region 142214
Tssr142215 16 93971122 to 93971134 12 - TSS region transcription start site region 142215
Tssr139534 16 93973763 to 93973797 34 + TSS region transcription start site region 139534