Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:76431207-77421216

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78 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(16Lipi-Usp25)1Dja 16 75540514 to 77116779 1576265 chromosomal deletion deletion, Chr 16, David J Adams 1
Gm45030 16 76427743 to 76502909 75166 - lincRNA gene predicted gene 45030
Gm30615 16 76454625 to 76471287 16662 - lncRNA gene predicted gene, 30615
Tssr139021 16 76500250 to 76500263 13 + TSS region transcription start site region 139021
Tssr139022 16 76548743 to 76548785 42 + TSS region transcription start site region 139022
Gm30726 16 76548798 to 76550857 2059 + lincRNA gene predicted gene, 30726
D16Mit176 16 76576433 to 76576550 117 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 176
Gm45029 16 76680513 to 76741443 60930 + lincRNA gene predicted gene 45029
Gm30790 16 76751793 to 76779092 27299 - lincRNA gene predicted gene, 30790
Tssr139023 16 76814520 to 76814524 4 + TSS region transcription start site region 139023
D16Mit188 16 76817593 to 76817716 123 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 188
1700063K16Rik 16 76821293 to 76821741 448 - pseudogene RIKEN cDNA 1700063K16 gene
Tssr139024 16 76824770 to 76824772 2 + TSS region transcription start site region 139024
Tssr139025 16 76926207 to 76926216 9 + TSS region transcription start site region 139025
Gm7501 16 76941616 to 76942183 567 + pseudogene predicted gene 7501
1700041M19Rik 16 77004228 to 77010881 6653 - lincRNA gene RIKEN cDNA 1700041M19 gene
Tssr141825 16 77010869 to 77010888 19 - TSS region transcription start site region 141825
Cpgi8373 16 77013310 to 77014442 1132 CpG island CpG island 8373
Tssr139026 16 77013700 to 77013775 75 + TSS region transcription start site region 139026
Usp25 16 77013706 to 77116780 103074 + protein coding gene ubiquitin specific peptidase 25
Tssr139027 16 77013777 to 77013788 11 + TSS region transcription start site region 139027
Tssr139028 16 77013810 to 77013817 7 + TSS region transcription start site region 139028
Tssr139029 16 77026597 to 77026628 31 + TSS region transcription start site region 139029
Tssr139030 16 77037396 to 77037414 18 + TSS region transcription start site region 139030
Tssr139031 16 77071688 to 77071708 20 + TSS region transcription start site region 139031
Tssr139032 16 77071739 to 77071756 17 + TSS region transcription start site region 139032
Tssr139033 16 77074851 to 77074873 22 + TSS region transcription start site region 139033
Tssr139034 16 77077121 to 77077132 11 + TSS region transcription start site region 139034
Tssr139035 16 77077179 to 77077197 18 + TSS region transcription start site region 139035
Tssr139036 16 77085475 to 77085479 4 + TSS region transcription start site region 139036
Tssr139037 16 77093614 to 77093628 14 + TSS region transcription start site region 139037
Tssr139038 16 77111622 to 77111636 14 + TSS region transcription start site region 139038
Tssr139039 16 77115618 to 77115631 13 + TSS region transcription start site region 139039
Tssr139040 16 77115885 to 77115899 14 + TSS region transcription start site region 139040
Tssr139041 16 77124255 to 77124260 5 + TSS region transcription start site region 139041
Tssr139042 16 77236313 to 77236326 13 + TSS region transcription start site region 139042
Tssr139043 16 77247222 to 77247228 6 + TSS region transcription start site region 139043
Tssr139044 16 77261778 to 77261782 4 + TSS region transcription start site region 139044
Tssr139045 16 77301984 to 77301992 8 + TSS region transcription start site region 139045
Tssr139046 16 77302011 to 77302051 40 + TSS region transcription start site region 139046
Gm31258 16 77302264 to 77305560 3296 - lncRNA gene predicted gene, 31258
Tssr139047 16 77329195 to 77329245 50 + TSS region transcription start site region 139047
Tssr139048 16 77329246 to 77329353 107 + TSS region transcription start site region 139048
Mir99ahg 16 77329328 to 77558428 229100 + lncRNA gene Mir99a and Mirlet7c-1 host gene (non-protein coding)
Tssr139049 16 77329357 to 77329377 20 + TSS region transcription start site region 139049
Tssr139050 16 77329498 to 77329509 11 + TSS region transcription start site region 139050
Tssr139051 16 77329511 to 77329525 14 + TSS region transcription start site region 139051
Tssr141826 16 77329525 to 77329551 26 - TSS region transcription start site region 141826
Tssr139052 16 77329542 to 77329553 11 + TSS region transcription start site region 139052
Tssr139053 16 77329571 to 77329619 48 + TSS region transcription start site region 139053
Tssr139054 16 77329629 to 77329656 27 + TSS region transcription start site region 139054
Tssr139055 16 77338298 to 77338314 16 + TSS region transcription start site region 139055
Tssr139056 16 77340571 to 77340604 33 + TSS region transcription start site region 139056
Tssr139057 16 77340653 to 77340669 16 + TSS region transcription start site region 139057
Tssr139058 16 77351695 to 77351706 11 + TSS region transcription start site region 139058
Tssr139059 16 77351750 to 77351752 2 + TSS region transcription start site region 139059
D16Mit217 16 77361208 to 77361426 218 DNA segment DNA Segment, Chr 16 Massachusetts Institute of Technology 217
Tssr139060 16 77361518 to 77361526 8 + TSS region transcription start site region 139060
Tssr139061 16 77362441 to 77362459 18 + TSS region transcription start site region 139061
Tssr139062 16 77368376 to 77368397 21 + TSS region transcription start site region 139062
Tssr139063 16 77368876 to 77368902 26 + TSS region transcription start site region 139063
Tssr139064 16 77371582 to 77371612 30 + TSS region transcription start site region 139064
Tssr139065 16 77374705 to 77374730 25 + TSS region transcription start site region 139065
Tssr139066 16 77375327 to 77375365 38 + TSS region transcription start site region 139066
D16Ium70 16 77380766 to 77380954 188 DNA segment DNA segment, Chr 16, Indiana University Medical 70
Gm37466 16 77381950 to 77382601 651 + unclassified gene predicted gene, 37466
Tssr139067 16 77387915 to 77387932 17 + TSS region transcription start site region 139067
Tssr139068 16 77389922 to 77389938 16 + TSS region transcription start site region 139068
Tssr139069 16 77389972 to 77389984 12 + TSS region transcription start site region 139069
Tssr139070 16 77399951 to 77399964 13 + TSS region transcription start site region 139070
Gm21816 16 77400030 to 77403135 3105 + pseudogene predicted gene, 21816
9430092D12Rik 16 77413643 to 77414916 1273 + unclassified gene RIKEN cDNA 9430092D12 gene
Gm38071 16 77416624 to 77420001 3377 + unclassified gene predicted gene, 38071
Tssr139071 16 77417606 to 77417645 39 + TSS region transcription start site region 139071
9430053O09Rik 16 77419251 to 77421820 2569 - lncRNA gene RIKEN cDNA 9430053O09 gene
Tssr139072 16 77419745 to 77419759 14 + TSS region transcription start site region 139072
Tssr139073 16 77419845 to 77419849 4 + TSS region transcription start site region 139073
Tssr141827 16 77420279 to 77420308 29 - TSS region transcription start site region 141827