Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:3844687-3924709

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi7900 16 3846975 to 3847604 629 CpG island CpG island 7900
Tssr136829 16 3847206 to 3847307 101 + TSS region transcription start site region 136829
Zfp174 16 3847268 to 3858880 11612 + protein coding gene zinc finger protein 174
Zfp597 16 3861544 to 3884559 23015 - protein coding gene zinc finger protein 597
Gm26675 16 3862384 to 3884505 22121 + lincRNA gene predicted gene, 26675
Cpgi7901 16 3871974 to 3873033 1059 CpG island CpG island 7901
Tssr139726 16 3872231 to 3872249 18 - TSS region transcription start site region 139726
Tssr139727 16 3872255 to 3872283 28 - TSS region transcription start site region 139727
Tssr139728 16 3872286 to 3872315 29 - TSS region transcription start site region 139728
Tssr136830 16 3872368 to 3872385 17 + TSS region transcription start site region 136830
Tssr139729 16 3872378 to 3872411 33 - TSS region transcription start site region 139729
Tssr136831 16 3872411 to 3872420 9 + TSS region transcription start site region 136831
Naa60 16 3872453 to 3904781 32328 + protein coding gene N(alpha)-acetyltransferase 60, NatF catalytic subunit
Cpgi7902 16 3884145 to 3885363 1218 CpG island CpG island 7902
Tssr139730 16 3884438 to 3884470 32 - TSS region transcription start site region 139730
Tssr139731 16 3884472 to 3884572 100 - TSS region transcription start site region 139731
Tssr136832 16 3884629 to 3884652 23 + TSS region transcription start site region 136832
Gm20695 16 3884648 to 3919517 34869 + protein coding gene predicted gene 20695
Tssr136833 16 3884657 to 3884680 23 + TSS region transcription start site region 136833
Tssr136834 16 3884687 to 3884709 22 + TSS region transcription start site region 136834
Tssr136835 16 3884718 to 3884738 20 + TSS region transcription start site region 136835
Tssr136836 16 3884740 to 3884761 21 + TSS region transcription start site region 136836
Tssr136837 16 3889704 to 3889714 10 + TSS region transcription start site region 136837
Gm41410 16 3895179 to 3897314 2135 - lncRNA gene predicted gene, 41410
Tssr139732 16 3895561 to 3895596 35 - TSS region transcription start site region 139732
1700037C18Rik 16 3905798 to 3908689 2891 - protein coding gene RIKEN cDNA 1700037C18 gene
Tssr139733 16 3907695 to 3907707 12 - TSS region transcription start site region 139733
Tssr139734 16 3907710 to 3907717 7 - TSS region transcription start site region 139734
Tssr4778 16 3907723 to 3907731 8 - TSS region transcription start site region 4778
Tssr139735 16 3907736 to 3907746 10 - TSS region transcription start site region 139735
Tssr136838 16 3907776 to 3907820 44 + TSS region transcription start site region 136838
Cpgi7903 16 3908492 to 3909322 830 CpG island CpG island 7903
Tssr139736 16 3908517 to 3908543 26 - TSS region transcription start site region 139736
Tssr139737 16 3908596 to 3908611 15 - TSS region transcription start site region 139737
Tssr139738 16 3908639 to 3908686 47 - TSS region transcription start site region 139738
Cluap1 16 3908801 to 3941147 32346 + protein coding gene clusterin associated protein 1
1700016D08Rik 16 3908825 to 3909192 367 - protein coding gene RIKEN cDNA 1700016D08 gene
Tssr136839 16 3908949 to 3909031 82 + TSS region transcription start site region 136839
Tssr136840 16 3909032 to 3909089 57 + TSS region transcription start site region 136840