Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:32007152-32487179

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135 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
nmf219 16 15913052 to 32312179 16399127 heritable phenotypic marker neuroscience mutagenesis facility, 219
Tssr140764 16 32010110 to 32010138 28 - TSS region transcription start site region 140764
Pak2 16 32016290 to 32079342 63052 - protein coding gene p21 (RAC1) activated kinase 2
Tssr140765 16 32017823 to 32017827 4 - TSS region transcription start site region 140765
Tssr140766 16 32019490 to 32019501 11 - TSS region transcription start site region 140766
Tssr140767 16 32019587 to 32019600 13 - TSS region transcription start site region 140767
Tssr140768 16 32027074 to 32027107 33 - TSS region transcription start site region 140768
Tssr140769 16 32052323 to 32052350 27 - TSS region transcription start site region 140769
Gm26419 16 32065910 to 32066042 132 + snoRNA gene predicted gene, 26419
Tssr140770 16 32073791 to 32073808 17 - TSS region transcription start site region 140770
Tssr140771 16 32078081 to 32078085 4 - TSS region transcription start site region 140771
Tssr137938 16 32078225 to 32078234 9 + TSS region transcription start site region 137938
Cpgi8182 16 32078749 to 32079673 924 CpG island CpG island 8182
Tssr140772 16 32079124 to 32079159 35 - TSS region transcription start site region 140772
Tssr140773 16 32079170 to 32079183 13 - TSS region transcription start site region 140773
Tssr140774 16 32079227 to 32079241 14 - TSS region transcription start site region 140774
Tssr140775 16 32079270 to 32079368 98 - TSS region transcription start site region 140775
Pigx 16 32084416 to 32099727 15311 - protein coding gene phosphatidylinositol glycan anchor biosynthesis, class X
Cpgi8183 16 32099031 to 32100122 1091 CpG island CpG island 8183
Tssr140776 16 32099620 to 32099635 15 - TSS region transcription start site region 140776
Tssr140777 16 32099669 to 32099696 27 - TSS region transcription start site region 140777
Tssr140778 16 32099697 to 32099752 55 - TSS region transcription start site region 140778
Tssr137939 16 32099781 to 32099857 76 + TSS region transcription start site region 137939
Cep19 16 32099802 to 32108054 8252 + protein coding gene centrosomal protein 19
Tssr137940 16 32099904 to 32099973 69 + TSS region transcription start site region 137940
Tssr137941 16 32100040 to 32100055 15 + TSS region transcription start site region 137941
Tssr137942 16 32102531 to 32102541 10 + TSS region transcription start site region 137942
Tssr137943 16 32102926 to 32102938 12 + TSS region transcription start site region 137943
Tssr137944 16 32105086 to 32105122 36 + TSS region transcription start site region 137944
Tssr137945 16 32108860 to 32108879 19 + TSS region transcription start site region 137945
Gm15729 16 32108865 to 32113743 4878 + lincRNA gene predicted gene 15729
Tssr4844 16 32109087 to 32109126 39 + TSS region transcription start site region 4844
Tssr137946 16 32114671 to 32114674 3 + TSS region transcription start site region 137946
Tssr4845 16 32118031 to 32118033 2 - TSS region transcription start site region 4845
Tssr140779 16 32130309 to 32130336 27 - TSS region transcription start site region 140779
Tssr140780 16 32136037 to 32136040 3 - TSS region transcription start site region 140780
Nrros 16 32142785 to 32165589 22804 - protein coding gene negative regulator of reactive oxygen species
Tssr137947 16 32142786 to 32142790 4 + TSS region transcription start site region 137947
Tssr137948 16 32142819 to 32142826 7 + TSS region transcription start site region 137948
Tssr140781 16 32143166 to 32143194 28 - TSS region transcription start site region 140781
Cpgi8184 16 32143247 to 32143568 321 CpG island CpG island 8184
Tssr140782 16 32144045 to 32144084 39 - TSS region transcription start site region 140782
Tssr140783 16 32144433 to 32144453 20 - TSS region transcription start site region 140783
Tssr140784 16 32144509 to 32144520 11 - TSS region transcription start site region 140784
Tssr140785 16 32145686 to 32145690 4 - TSS region transcription start site region 140785
Tssr140786 16 32163249 to 32163297 48 - TSS region transcription start site region 140786
Tssr140787 16 32163372 to 32163438 66 - TSS region transcription start site region 140787
Tssr140788 16 32163498 to 32163542 44 - TSS region transcription start site region 140788
Tssr140789 16 32164372 to 32164378 6 - TSS region transcription start site region 140789
Tssr140790 16 32164472 to 32164488 16 - TSS region transcription start site region 140790
Cpgi8185 16 32165234 to 32165569 335 CpG island CpG island 8185
Tssr140791 16 32165454 to 32165494 40 - TSS region transcription start site region 140791
Tssr140792 16 32165686 to 32165697 11 - TSS region transcription start site region 140792
Tssr140793 16 32174467 to 32174480 13 - TSS region transcription start site region 140793
Tssr140794 16 32176922 to 32176954 32 - TSS region transcription start site region 140794
Tssr137949 16 32177578 to 32177589 11 + TSS region transcription start site region 137949
Tssr137950 16 32177663 to 32177675 12 + TSS region transcription start site region 137950
Tssr140795 16 32179579 to 32179586 7 - TSS region transcription start site region 140795
Tssr140796 16 32179596 to 32179608 12 - TSS region transcription start site region 140796
Tssr140797 16 32179614 to 32179637 23 - TSS region transcription start site region 140797
Tssr140798 16 32179675 to 32179688 13 - TSS region transcription start site region 140798
Tssr137951 16 32179776 to 32179788 12 + TSS region transcription start site region 137951
Tssr137952 16 32179794 to 32179835 41 + TSS region transcription start site region 137952
Bex6 16 32179800 to 32186944 7144 + protein coding gene brain expressed family member 6
Tssr137953 16 32179838 to 32179850 12 + TSS region transcription start site region 137953
Tssr137954 16 32179854 to 32179857 3 + TSS region transcription start site region 137954
Tssr137955 16 32183932 to 32183934 2 + TSS region transcription start site region 137955
Fbxo45 16 32230112 to 32247025 16913 - protein coding gene F-box protein 45
5730596P11Rik 16 32241064 to 32242828 1764 unclassified gene RIKEN cDNA 5730596P11 gene
Gm25848 16 32243712 to 32243855 143 - snoRNA gene predicted gene, 25848
Tssr140799 16 32243852 to 32243855 3 - TSS region transcription start site region 140799
Cpgi8186 16 32246308 to 32247496 1188 CpG island CpG island 8186
Tssr140800 16 32246879 to 32246947 68 - TSS region transcription start site region 140800
Tssr140801 16 32247103 to 32247148 45 - TSS region transcription start site region 140801
Tssr140802 16 32247152 to 32247179 27 - TSS region transcription start site region 140802
Tssr137956 16 32247221 to 32247283 62 + TSS region transcription start site region 137956
Wdr53 16 32247227 to 32257083 9856 + protein coding gene WD repeat domain 53
Mir1946a 16 32267450 to 32267583 133 - miRNA gene microRNA 1946a
Tssr137957 16 32271473 to 32271523 50 + TSS region transcription start site region 137957
Tssr137958 16 32271530 to 32271544 14 + TSS region transcription start site region 137958
Tssr137959 16 32271545 to 32271559 14 + TSS region transcription start site region 137959
Smco1 16 32271609 to 32274779 3170 + protein coding gene single-pass membrane protein with coiled-coil domains 1
Cpgi8187 16 32277321 to 32278321 1000 CpG island CpG island 8187
Tssr137960 16 32277449 to 32277462 13 + TSS region transcription start site region 137960
Rnf168 16 32277459 to 32301434 23975 + protein coding gene ring finger protein 168
Tssr137961 16 32277479 to 32277524 45 + TSS region transcription start site region 137961
Tssr137962 16 32277528 to 32277566 38 + TSS region transcription start site region 137962
Tssr137963 16 32277648 to 32277651 3 + TSS region transcription start site region 137963
5830438M01Rik 16 32303126 to 32304493 1367 unclassified gene RIKEN cDNA 5830438M01 gene
Tssr137964 16 32303809 to 32303813 4 + TSS region transcription start site region 137964
repro33 16 32312022 to 97830295 65518273 heritable phenotypic marker reproductive mutant 33, JAX Reproductive Mutagenesis Program
D16Mit58 16 32312022 to 32312179 157 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 58
Aod1 16 32312022 to 32704294 392272 QTL autoimmune ovarian dysgenesis 1
Tssr137965 16 32312541 to 32312544 3 + TSS region transcription start site region 137965
Tssr137966 16 32324321 to 32324330 9 + TSS region transcription start site region 137966
Gm8387 16 32326181 to 32326695 514 - pseudogene predicted gene 8387
Cpgi8188 16 32332019 to 32333335 1316 CpG island CpG island 8188
Tssr137967 16 32332238 to 32332266 28 + TSS region transcription start site region 137967
Ubxn7 16 32332257 to 32393747 61490 + protein coding gene UBX domain protein 7
Tssr137968 16 32375964 to 32375995 31 + TSS region transcription start site region 137968
Tssr137969 16 32379936 to 32379941 5 + TSS region transcription start site region 137969
Tssr137970 16 32385098 to 32385113 15 + TSS region transcription start site region 137970
Tssr137971 16 32388777 to 32388781 4 + TSS region transcription start site region 137971
Tm4sf19 16 32400506 to 32408227 7721 + protein coding gene transmembrane 4 L six family member 19
Tssr137972 16 32400657 to 32400668 11 + TSS region transcription start site region 137972
Tssr137973 16 32400725 to 32400734 9 + TSS region transcription start site region 137973
Tssr137974 16 32400771 to 32400785 14 + TSS region transcription start site region 137974
Tssr137975 16 32400802 to 32400813 11 + TSS region transcription start site region 137975
Tssr137976 16 32400821 to 32400834 13 + TSS region transcription start site region 137976
Tssr140803 16 32402915 to 32402937 22 - TSS region transcription start site region 140803
Gm20056 16 32408536 to 32409054 518 + pseudogene predicted gene, 20056
Cpgi8189 16 32419558 to 32420122 564 CpG island CpG island 8189
Tssr137977 16 32419696 to 32419753 57 + TSS region transcription start site region 137977
Tctex1d2 16 32419702 to 32429099 9397 + protein coding gene Tctex1 domain containing 2
Tssr137978 16 32419761 to 32419799 38 + TSS region transcription start site region 137978
Cpgi8190 16 32430421 to 32431649 1228 CpG island CpG island 8190
Tssr137979 16 32430607 to 32430618 11 + TSS region transcription start site region 137979
Tssr137980 16 32430895 to 32430978 83 + TSS region transcription start site region 137980
Pcyt1a 16 32430921 to 32475065 44144 + protein coding gene phosphate cytidylyltransferase 1, choline, alpha isoform
Tssr137981 16 32430985 to 32430990 5 + TSS region transcription start site region 137981
Tssr137982 16 32431023 to 32431034 11 + TSS region transcription start site region 137982
Tssr137983 16 32431043 to 32431054 11 + TSS region transcription start site region 137983
Tssr140804 16 32431078 to 32431117 39 - TSS region transcription start site region 140804
Tssr137984 16 32431092 to 32431102 10 + TSS region transcription start site region 137984
Tssr137985 16 32431225 to 32431280 55 + TSS region transcription start site region 137985
Tssr137986 16 32431290 to 32431308 18 + TSS region transcription start site region 137986
9030420N05Rik 16 32436746 to 32438933 2187 unclassified gene RIKEN cDNA 9030420N05 gene
2210020O09Rik 16 32454598 to 32456149 1551 - antisense lncRNA gene RIKEN cDNA 2210020O09 gene
Tssr137987 16 32467180 to 32467184 4 + TSS region transcription start site region 137987
Tssr137988 16 32471496 to 32471530 34 + TSS region transcription start site region 137988
Slc51a 16 32475578 to 32487879 12301 - protein coding gene solute carrier family 51, alpha subunit
Tssr140805 16 32477627 to 32477634 7 - TSS region transcription start site region 140805
Tssr140806 16 32486168 to 32486175 7 - TSS region transcription start site region 140806
Tssr140807 16 32487152 to 32487161 9 - TSS region transcription start site region 140807
Tssr140808 16 32487168 to 32487191 23 - TSS region transcription start site region 140808