MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:11538169-11841857

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Snx29	16	11322908 to 11755472	432564	+	protein coding gene	sorting nexin 29
5830487K18Rik	16	11549741 to 11551159	1418		unclassified gene	RIKEN cDNA 5830487K18 gene
Gm32100	16	11583706 to 11588531	4825	+	lncRNA gene	predicted gene, 32100
Tssr137105	16	11584508 to 11584513	5	+	TSS region	transcription start site region 137105
Tssr137106	16	11615880 to 11615902	22	+	TSS region	transcription start site region 137106
D16Mit81	16	11616382 to 11616494	112		DNA segment	DNA segment, Chr 16, Massachusetts Institute of Technology 81
Dice1	16	11616382 to 11616494	112		QTL	determination of interleukin 4 commitment 1
Tssr137107	16	11632081 to 11632085	4	+	TSS region	transcription start site region 137107
Tssr140027	16	11633171 to 11633177	6	-	TSS region	transcription start site region 140027
Tssr137108	16	11644708 to 11644749	41	+	TSS region	transcription start site region 137108
Tssr137109	16	11656117 to 11656137	20	+	TSS region	transcription start site region 137109
Tssr137110	16	11656144 to 11656155	11	+	TSS region	transcription start site region 137110
Gm4279	16	11688169 to 11691857	3688	-	antisense lncRNA gene	predicted gene 4279
Tssr137111	16	11778448 to 11778465	17	+	TSS region	transcription start site region 137111
4833415N18Rik	16	11779702 to 11781501	1799	+	lincRNA gene	RIKEN cDNA 4833415N18 gene
Cpped1	16	11803721 to 11909445	105724	-	protein coding gene	calcineurin-like phosphoesterase domain containing 1
Tssr140028	16	11804985 to 11804998	13	-	TSS region	transcription start site region 140028