Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 15:98803918-99018098

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110 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ddn 15 98803782 to 98807925 4143 - protein coding gene dendrin
Cpgi7675 15 98804051 to 98804578 527 CpG island CpG island 7675
Tssr136286 15 98804090 to 98804114 24 - TSS region transcription start site region 136286
Cpgi7676 15 98805062 to 98808362 3300 CpG island CpG island 7676
B130046B21Rik 15 98806315 to 98810380 4065 + lncRNA gene RIKEN cDNA B130046B21 gene
Tssr136287 15 98807890 to 98807908 18 - TSS region transcription start site region 136287
Tssr136288 15 98807910 to 98807932 22 - TSS region transcription start site region 136288
Tssr136289 15 98807940 to 98807956 16 - TSS region transcription start site region 136289
Tssr136290 15 98807962 to 98807976 14 - TSS region transcription start site region 136290
Tssr136291 15 98807995 to 98808002 7 - TSS region transcription start site region 136291
Tssr136292 15 98808306 to 98808318 12 - TSS region transcription start site region 136292
Tssr136293 15 98809487 to 98809492 5 - TSS region transcription start site region 136293
Prkag1 15 98812797 to 98831508 18711 - protein coding gene protein kinase, AMP-activated, gamma 1 non-catalytic subunit
Cpgi7677 15 98830743 to 98831673 930 CpG island CpG island 7677
Tssr132965 15 98830853 to 98830865 12 + TSS region transcription start site region 132965
Tssr136294 15 98831316 to 98831358 42 - TSS region transcription start site region 136294
Tssr136295 15 98831436 to 98831450 14 - TSS region transcription start site region 136295
Tssr136296 15 98831452 to 98831488 36 - TSS region transcription start site region 136296
Tssr136297 15 98831498 to 98831509 11 - TSS region transcription start site region 136297
Kmt2d 15 98831669 to 98871204 39535 - protein coding gene lysine (K)-specific methyltransferase 2D
Tssr136298 15 98832103 to 98832107 4 - TSS region transcription start site region 136298
Tssr136299 15 98832475 to 98832480 5 - TSS region transcription start site region 136299
Tssr132966 15 98835950 to 98835952 2 + TSS region transcription start site region 132966
Tssr136300 15 98845603 to 98845629 26 - TSS region transcription start site region 136300
Tssr136301 15 98845729 to 98845743 14 - TSS region transcription start site region 136301
Tssr136302 15 98845760 to 98845772 12 - TSS region transcription start site region 136302
Tssr136303 15 98845779 to 98845794 15 - TSS region transcription start site region 136303
Tssr136304 15 98846128 to 98846146 18 - TSS region transcription start site region 136304
Tssr136305 15 98846174 to 98846199 25 - TSS region transcription start site region 136305
Tssr136306 15 98846295 to 98846309 14 - TSS region transcription start site region 136306
Tssr136307 15 98862904 to 98862918 14 - TSS region transcription start site region 136307
Tssr136308 15 98863937 to 98863960 23 - TSS region transcription start site region 136308
Tssr136309 15 98863988 to 98864007 19 - TSS region transcription start site region 136309
Tssr136310 15 98867423 to 98867434 11 - TSS region transcription start site region 136310
Cpgi7678 15 98870821 to 98872587 1766 CpG island CpG island 7678
Tssr132967 15 98871015 to 98871046 31 + TSS region transcription start site region 132967
Tssr136311 15 98871175 to 98871187 12 - TSS region transcription start site region 136311
Tssr136312 15 98871966 to 98872003 37 - TSS region transcription start site region 136312
Tssr136313 15 98872158 to 98872184 26 - TSS region transcription start site region 136313
Tssr136314 15 98872186 to 98872233 47 - TSS region transcription start site region 136314
Gm49437 15 98872329 to 98872613 284 - unclassified gene predicted gene, 49437
5730414N17Rik 15 98872644 to 98874082 1438 + lncRNA gene RIKEN cDNA 5730414N17 gene
Rhebl1 15 98877760 to 98881497 3737 - protein coding gene Ras homolog enriched in brain like 1
Cpgi7679 15 98880851 to 98881587 736 CpG island CpG island 7679
Tssr136315 15 98881220 to 98881240 20 - TSS region transcription start site region 136315
Tssr136316 15 98881255 to 98881316 61 - TSS region transcription start site region 136316
Tssr136317 15 98881361 to 98881381 20 - TSS region transcription start site region 136317
Tssr136318 15 98881388 to 98881410 22 - TSS region transcription start site region 136318
Dhh 15 98891152 to 98898540 7388 - protein coding gene desert hedgehog
Tssr136319 15 98892188 to 98892192 4 - TSS region transcription start site region 136319
Gm49442 15 98893351 to 98895175 1824 + lncRNA gene predicted gene, 49442
Cpgi7680 15 98893352 to 98895280 1928 CpG island CpG island 7680
Tssr136320 15 98895411 to 98895432 21 - TSS region transcription start site region 136320
Cpgi7681 15 98895442 to 98896001 559 CpG island CpG island 7681
Cpgi7682 15 98897632 to 98898566 934 CpG island CpG island 7682
Tssr136321 15 98898458 to 98898467 9 - TSS region transcription start site region 136321
Tssr136322 15 98898483 to 98898558 75 - TSS region transcription start site region 136322
Lmbr1l 15 98903918 to 98918098 14180 - protein coding gene limb region 1 like
Cpgi7683 15 98917235 to 98918450 1215 CpG island CpG island 7683
Tssr132968 15 98917651 to 98917698 47 + TSS region transcription start site region 132968
Tssr136323 15 98918014 to 98918103 89 - TSS region transcription start site region 136323
Tssr136324 15 98918131 to 98918142 11 - TSS region transcription start site region 136324
D15Mit148 15 98927666 to 98927809 143 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 148
Tuba1b 15 98931429 to 98934390 2961 - protein coding gene tubulin, alpha 1B
Gm49450 15 98932137 to 98953551 21414 - protein coding gene predicted gene, 49450
Cpgi7684 15 98933740 to 98934941 1201 CpG island CpG island 7684
Tssr136325 15 98933922 to 98933937 15 - TSS region transcription start site region 136325
Gm41396 15 98934325 to 98940553 6228 + lncRNA gene predicted gene, 41396
Tssr136326 15 98934438 to 98934444 6 - TSS region transcription start site region 136326
Tssr136327 15 98934447 to 98934505 58 - TSS region transcription start site region 136327
Tssr136328 15 98934522 to 98934586 64 - TSS region transcription start site region 136328
Tssr136329 15 98934602 to 98934612 10 - TSS region transcription start site region 136329
Tssr132969 15 98934626 to 98934689 63 + TSS region transcription start site region 132969
Tssr136330 15 98937327 to 98937351 24 - TSS region transcription start site region 136330
Tssr136331 15 98937355 to 98937386 31 - TSS region transcription start site region 136331
Tssr136332 15 98937388 to 98937413 25 - TSS region transcription start site region 136332
Gm49449 15 98942550 to 98943665 1115 + unclassified gene predicted gene, 49449
Tuba1a 15 98949847 to 98953501 3654 - protein coding gene tubulin, alpha 1A
Tssr136333 15 98951257 to 98951278 21 - TSS region transcription start site region 136333
Cpgi7685 15 98952989 to 98953716 727 CpG island CpG island 7685
Tssr132970 15 98953051 to 98953074 23 + TSS region transcription start site region 132970
Tssr136334 15 98953475 to 98953519 44 - TSS region transcription start site region 136334
Tssr136335 15 98953528 to 98953533 5 - TSS region transcription start site region 136335
Tssr136336 15 98953541 to 98953560 19 - TSS region transcription start site region 136336
Tssr136337 15 98953587 to 98953591 4 - TSS region transcription start site region 136337
Tssr136338 15 98953597 to 98953607 10 - TSS region transcription start site region 136338
Tssr136339 15 98953637 to 98953659 22 - TSS region transcription start site region 136339
Tssr136340 15 98953662 to 98953676 14 - TSS region transcription start site region 136340
Tssr136341 15 98953688 to 98953699 11 - TSS region transcription start site region 136341
Tssr132971 15 98953744 to 98953769 25 + TSS region transcription start site region 132971
B430209F14Rik 15 98955333 to 98979356 24023 + lncRNA gene RIKEN cDNA B430209F14 gene
Tssr136342 15 98955459 to 98955486 27 - TSS region transcription start site region 136342
Tssr136343 15 98957147 to 98957171 24 - TSS region transcription start site region 136343
Tssr132972 15 98983407 to 98983438 31 + TSS region transcription start site region 132972
Tssr132973 15 98983687 to 98983702 15 + TSS region transcription start site region 132973
Tssr132974 15 98983704 to 98983732 28 + TSS region transcription start site region 132974
Tssr132975 15 98983734 to 98983747 13 + TSS region transcription start site region 132975
Tssr132976 15 98983940 to 98983951 11 + TSS region transcription start site region 132976
Cpgi7686 15 98985523 to 98985939 416 CpG island CpG island 7686
Tssr136344 15 98985767 to 98985779 12 - TSS region transcription start site region 136344
Tssr136345 15 98985822 to 98985843 21 - TSS region transcription start site region 136345
4930578M01Rik 15 98985965 to 98989281 3316 + lncRNA gene RIKEN cDNA 4930578M01 gene
Tssr136346 15 98989864 to 98989876 12 - TSS region transcription start site region 136346
Tssr132977 15 98990000 to 98990017 17 + TSS region transcription start site region 132977
Tssr136347 15 98992602 to 98992613 11 - TSS region transcription start site region 136347
Tssr132978 15 98992800 to 98992814 14 + TSS region transcription start site region 132978
Cpgi7687 15 98993077 to 98993610 533 CpG island CpG island 7687
Tssr132979 15 98993250 to 98993289 39 + TSS region transcription start site region 132979
Gm8973 15 99006057 to 99006369 312 + pseudogene predicted gene 8973
Gm41398 15 99015373 to 99024281 8908 - lncRNA gene predicted gene, 41398