Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:89011052-89152075

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mov10l1 15 88982909 to 89055152 72243 + protein coding gene Moloney leukemia virus 10-like 1
Tssr132628 15 89019219 to 89019228 9 + TSS region transcription start site region 132628
Gm23737 15 89019221 to 89019379 158 + snRNA gene predicted gene, 23737
Tssr132629 15 89020301 to 89020319 18 + TSS region transcription start site region 132629
Tssr132630 15 89020328 to 89020339 11 + TSS region transcription start site region 132630
Tssr132631 15 89020340 to 89020355 15 + TSS region transcription start site region 132631
Tssr132632 15 89020397 to 89020420 23 + TSS region transcription start site region 132632
Cpgi7522 15 89059215 to 89060827 1612 CpG island CpG island 7522
Tssr132633 15 89059712 to 89059760 48 + TSS region transcription start site region 132633
Panx2 15 89059734 to 89073567 13833 + protein coding gene pannexin 2
Tssr132634 15 89059761 to 89059782 21 + TSS region transcription start site region 132634
Tssr132635 15 89059785 to 89059804 19 + TSS region transcription start site region 132635
Tssr132636 15 89060068 to 89060100 32 + TSS region transcription start site region 132636
Cpgi7523 15 89067496 to 89068808 1312 CpG island CpG island 7523
Cpgi7524 15 89070542 to 89070863 321 CpG island CpG island 7524
1810021B22Rik 15 89071198 to 89075854 4656 - antisense lncRNA gene RIKEN cDNA 1810021B22 gene
Tssr135835 15 89074123 to 89074145 22 - TSS region transcription start site region 135835
Cpgi7525 15 89075341 to 89076735 1394 CpG island CpG island 7525
Tssr135836 15 89075893 to 89075951 58 - TSS region transcription start site region 135836
Tssr132637 15 89075996 to 89076038 42 + TSS region transcription start site region 132637
Trabd 15 89076052 to 89087075 11023 + protein coding gene TraB domain containing
Tssr132638 15 89076058 to 89076105 47 + TSS region transcription start site region 132638
Tssr132639 15 89076128 to 89076147 19 + TSS region transcription start site region 132639
9030419F21Rik 15 89079187 to 89080560 1373 unclassified gene RIKEN cDNA 9030419F21 gene
Tssr132640 15 89079332 to 89079336 4 + TSS region transcription start site region 132640
Cpgi7526 15 89088750 to 89090043 1293 CpG island CpG island 7526
Tssr132641 15 89089073 to 89089111 38 + TSS region transcription start site region 132641
Selenoo 15 89089107 to 89100340 11233 + protein coding gene selenoprotein O
Tubgcp6 15 89099097 to 89123208 24111 - protein coding gene tubulin, gamma complex associated protein 6
Tssr132642 15 89099254 to 89099266 12 + TSS region transcription start site region 132642
Tssr135837 15 89106167 to 89106178 11 - TSS region transcription start site region 135837
Cpgi7527 15 89122496 to 89123747 1251 CpG island CpG island 7527
Tssr135838 15 89123111 to 89123173 62 - TSS region transcription start site region 135838
Hdac10 15 89123307 to 89128700 5393 - protein coding gene histone deacetylase 10
Cpgi7528 15 89128236 to 89129003 767 CpG island CpG island 7528
Tssr135839 15 89128634 to 89128693 59 - TSS region transcription start site region 135839
Gm46530 15 89128727 to 89133139 4412 + lncRNA gene predicted gene, 46530
Mapk12 15 89130584 to 89140703 10119 - protein coding gene mitogen-activated protein kinase 12
Tssr135840 15 89137582 to 89137600 18 - TSS region transcription start site region 135840
Cpgi7529 15 89139989 to 89140911 922 CpG island CpG island 7529
Tssr135841 15 89140664 to 89140696 32 - TSS region transcription start site region 135841
Mapk11 15 89142482 to 89149606 7124 - protein coding gene mitogen-activated protein kinase 11
D15Jmp9 15 89143520 to 89143653 133 DNA segment DNA segment, Chr 15, Jackson Laboratory Mapping Panels 9
Cpgi7530 15 89145988 to 89147249 1261 CpG island CpG island 7530
Tssr135842 15 89147028 to 89147064 36 - TSS region transcription start site region 135842
Tssr135843 15 89147149 to 89147195 46 - TSS region transcription start site region 135843
Cpgi7531 15 89149099 to 89150054 955 CpG island CpG island 7531
Tssr135844 15 89149557 to 89149650 93 - TSS region transcription start site region 135844