Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:43749340-46170361

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89 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cocia16 15 33497411 to 45277417 11780006 QTL cocaine induced activation 16
Bbaa31 15 41599176 to 43794128 2194952 QTL B.burgdorferi-associated arthritis 31
D15Mit274 15 43783428 to 43783534 106 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology-274
Tssr134191 15 43783981 to 43783984 3 - TSS region transcription start site region 134191
D15Mit154 15 43793979 to 43794128 149 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 154
Gm2140 15 43808461 to 43808924 463 + pseudogene predicted gene 2140
Tmem74 15 43866695 to 43870614 3919 - protein coding gene transmembrane protein 74
Cpgi7072 15 43869854 to 43870063 209 CpG island CpG island 7072
Tssr134192 15 43869971 to 43869976 5 - TSS region transcription start site region 134192
Tssr134193 15 43869993 to 43870058 65 - TSS region transcription start site region 134193
Tssr4590 15 43994585 to 43994587 2 - TSS region transcription start site region 4590
Tssr131223 15 44064197 to 44064203 6 + TSS region transcription start site region 131223
Trhr 15 44196135 to 44235912 39777 + protein coding gene thyrotropin releasing hormone receptor
D15Mit60 15 44264658 to 44264835 177 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 60
Gm33793 15 44265842 to 44267319 1477 - lncRNA gene predicted gene, 33793
Gm7459 15 44281981 to 44283775 1794 + pseudogene predicted gene 7459
D15Mit268 15 44306093 to 44306187 94 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 268
Gm19235 15 44323112 to 44324112 1000 + pseudogene predicted gene, 19235
Gm24903 15 44345650 to 44345775 125 + snoRNA gene predicted gene, 24903
Gm25093 15 44364085 to 44364216 131 + snoRNA gene predicted gene, 25093
Nudcd1 15 44375227 to 44428307 53080 - protein coding gene NudC domain containing 1
Tssr134194 15 44422670 to 44422671 1 - TSS region transcription start site region 134194
Cpgi7073 15 44427327 to 44428598 1271 CpG island CpG island 7073
Tssr131224 15 44427400 to 44427413 13 + TSS region transcription start site region 131224
Tssr134195 15 44427794 to 44427813 19 - TSS region transcription start site region 134195
Tssr134196 15 44427827 to 44427912 85 - TSS region transcription start site region 134196
Tssr131225 15 44428073 to 44428174 101 + TSS region transcription start site region 131225
Eny2 15 44428081 to 44438256 10175 + protein coding gene ENY2 transcription and export complex 2 subunit
Tssr134197 15 44428303 to 44428337 34 - TSS region transcription start site region 134197
Gm22392 15 44432595 to 44432701 106 + snRNA gene predicted gene, 22392
Cpgi7074 15 44457367 to 44457543 176 CpG island CpG island 7074
Tssr131226 15 44457423 to 44457434 11 + TSS region transcription start site region 131226
Tssr131227 15 44457445 to 44457486 41 + TSS region transcription start site region 131227
Tssr131228 15 44457491 to 44457496 5 + TSS region transcription start site region 131228
Pkhd1l1 15 44457494 to 44601369 143875 + protein coding gene polycystic kidney and hepatic disease 1-like 1
Tssr131229 15 44457498 to 44457517 19 + TSS region transcription start site region 131229
Tssr131230 15 44457522 to 44457534 12 + TSS region transcription start site region 131230
Cpgi7075 15 44618940 to 44619953 1013 CpG island CpG island 7075
Tssr131231 15 44619149 to 44619192 43 + TSS region transcription start site region 131231
Ebag9 15 44619175 to 44641515 22340 + protein coding gene estrogen receptor-binding fragment-associated gene 9
Tssr131232 15 44619224 to 44619242 18 + TSS region transcription start site region 131232
Tssr131233 15 44619271 to 44619328 57 + TSS region transcription start site region 131233
Tssr131234 15 44619551 to 44619630 79 + TSS region transcription start site region 131234
Tssr134198 15 44619910 to 44619912 2 - TSS region transcription start site region 134198
D15Mit182 15 44668521 to 44668737 216 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 182
Sybu 15 44671856 to 44788063 116207 - protein coding gene syntabulin (syntaxin-interacting)
Tssr134199 15 44691690 to 44691695 5 - TSS region transcription start site region 134199
Tssr134200 15 44706443 to 44706469 26 - TSS region transcription start site region 134200
Tssr134201 15 44706492 to 44706505 13 - TSS region transcription start site region 134201
2900046L07Rik 15 44716447 to 44718250 1803 unclassified gene RIKEN cDNA 2900046L07 gene
Tssr134202 15 44729015 to 44729020 5 - TSS region transcription start site region 134202
Tssr134203 15 44746574 to 44746597 23 - TSS region transcription start site region 134203
Cpgi7076 15 44748035 to 44749029 994 CpG island CpG island 7076
Tssr134204 15 44748361 to 44748377 16 - TSS region transcription start site region 134204
Tssr134205 15 44748397 to 44748408 11 - TSS region transcription start site region 134205
Tssr134206 15 44748422 to 44748442 20 - TSS region transcription start site region 134206
Tssr134207 15 44748444 to 44748483 39 - TSS region transcription start site region 134207
Gm33908 15 44748470 to 44752079 3609 + lncRNA gene predicted gene, 33908
Tssr134208 15 44752180 to 44752239 59 - TSS region transcription start site region 134208
Tssr134209 15 44752248 to 44752265 17 - TSS region transcription start site region 134209
Cpgi7077 15 44787389 to 44788153 764 CpG island CpG island 7077
Tssr131235 15 44787746 to 44787769 23 + TSS region transcription start site region 131235
2310069G16Rik 15 44787763 to 44805829 18066 + lncRNA gene RIKEN cDNA 2310069G16 gene
Tssr134210 15 44788016 to 44788031 15 - TSS region transcription start site region 134210
Gm33852 15 44818945 to 44837390 18445 - lncRNA gene predicted gene, 33852
D15Mit166 15 44849375 to 44849508 133 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 166
A930017M01Rik 15 44881394 to 44884743 3349 + pseudogene RIKEN cDNA A930017M01 gene
Gm24768 15 44940542 to 44940635 93 + snRNA gene predicted gene, 24768
Gm23343 15 44948104 to 44948246 142 + snoRNA gene predicted gene, 23343
Gm18153 15 44959340 to 44960361 1021 + pseudogene predicted gene, 18153
Gm5471 15 44971797 to 44972133 336 - pseudogene predicted pseudogene 5471
D15Mit114 15 45046677 to 45046814 137 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 114
Kcnv1 15 45106284 to 45114920 8636 - protein coding gene potassium channel, subfamily V, member 1
Cpgi7078 15 45114109 to 45114962 853 CpG island CpG island 7078
Tssr134211 15 45114441 to 45114461 20 - TSS region transcription start site region 134211
Tssr134212 15 45114660 to 45114676 16 - TSS region transcription start site region 134212
Tssr134213 15 45114863 to 45114872 9 - TSS region transcription start site region 134213
Tssr134214 15 45114896 to 45114908 12 - TSS region transcription start site region 134214
Tssr134215 15 45114926 to 45114938 12 - TSS region transcription start site region 134215
Lfibq26 15 45277417 to 51075548 5798131 QTL liver fibrosis QTL 26
Bpq6 15 45419250 to 45419343 93 QTL blood pressure QTL 6
Bsbob5 15 45419250 to 45419343 93 QTL BSB obesity 5
D15Mit152 15 45419250 to 45419343 93 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 152
Tssr4591 15 45583507 to 45583510 3 + TSS region transcription start site region 4591
D15Mit86 15 45616018 to 45616188 170 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 86
Tssr134216 15 45632374 to 45632417 43 - TSS region transcription start site region 134216
Gm2203 15 45962526 to 45963459 933 + pseudogene predicted gene 2203
Gm5472 15 45978360 to 45980037 1677 - pseudogene predicted gene 5472
Gm26063 15 46151698 to 46151804 106 - snRNA gene predicted gene, 26063