Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:41864736-43094745

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Abra 15 41865293 to 41869720 4427 - protein coding gene actin-binding Rho activating protein
Tssr134158 15 41869692 to 41869701 9 - TSS region transcription start site region 134158
Tssr134159 15 41869703 to 41869727 24 - TSS region transcription start site region 134159
Gm5469 15 41922075 to 41922944 869 + pseudogene predicted gene 5469
Gm24751 15 41948997 to 41949098 101 + snoRNA gene predicted gene, 24751
Gm5470 15 42031319 to 42032742 1423 - pseudogene predicted gene 5470
Tssr134160 15 42033839 to 42033862 23 - TSS region transcription start site region 134160
Gm49439 15 42041425 to 42067553 26128 - lincRNA gene predicted gene, 49439
Gm49438 15 42055216 to 42056140 924 - unclassified gene predicted gene, 49438
Gm49440 15 42161546 to 42161875 329 - pseudogene predicted gene, 49440
Gm49441 15 42196784 to 42201302 4518 + lincRNA gene predicted gene, 49441
Gm18531 15 42256063 to 42256780 717 - pseudogene predicted gene, 18531
Gm49452 15 42311265 to 42320346 9081 - lincRNA gene predicted gene, 49452
Gm18092 15 42328601 to 42329420 819 - pseudogene predicted gene, 18092
Gm49453 15 42399755 to 42400427 672 + pseudogene predicted gene, 49453
Angpt1 15 42424723 to 42676977 252254 - protein coding gene angiopoietin 1
Bdt6 15 42432410 to 42432532 122 QTL bone density traits 6
D15Mit206 15 42432410 to 42432532 122 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 206
Tssr134161 15 42472714 to 42472722 8 - TSS region transcription start site region 134161
Tssr131218 15 42479736 to 42479745 9 + TSS region transcription start site region 131218
Tssr134162 15 42571194 to 42571198 4 - TSS region transcription start site region 134162
Tssr134163 15 42585538 to 42585543 5 - TSS region transcription start site region 134163
Tssr134164 15 42586290 to 42586295 5 - TSS region transcription start site region 134164
Radsvq1 15 42621582 to 42621582 0 QTL radiation sensitivity QTL 1
Gm41313 15 42631048 to 42666066 35018 - lncRNA gene predicted gene, 41313
Tssr131219 15 42638820 to 42638832 12 + TSS region transcription start site region 131219
Tssr134165 15 42676095 to 42676116 21 - TSS region transcription start site region 134165
Cpgi7068 15 42676208 to 42676460 252 CpG island CpG island 7068
Gm17473 15 42676241 to 42704616 28375 + antisense lncRNA gene predicted gene, 17473
Tssr134166 15 42676269 to 42676303 34 - TSS region transcription start site region 134166
Tssr134167 15 42676304 to 42676344 40 - TSS region transcription start site region 134167
Tssr134168 15 42676489 to 42676522 33 - TSS region transcription start site region 134168
Tssr134169 15 42676743 to 42676760 17 - TSS region transcription start site region 134169
Tssr134170 15 42676771 to 42676791 20 - TSS region transcription start site region 134170
Tssr134171 15 42676792 to 42676803 11 - TSS region transcription start site region 134171
Tssr134172 15 42676812 to 42676827 15 - TSS region transcription start site region 134172
Tssr134173 15 42676898 to 42676931 33 - TSS region transcription start site region 134173
Tssr134174 15 42676938 to 42676952 14 - TSS region transcription start site region 134174
Tssr134175 15 42676953 to 42676954 1 - TSS region transcription start site region 134175
Tssr134176 15 42676967 to 42676978 11 - TSS region transcription start site region 134176
Tssr134177 15 42680673 to 42680693 20 - TSS region transcription start site region 134177
Gm41314 15 42704755 to 42789365 84610 + lncRNA gene predicted gene, 41314
Gm46505 15 42874445 to 42983278 108833 - lncRNA gene predicted gene, 46505
Gm41315 15 42942348 to 42950929 8581 + lncRNA gene predicted gene, 41315
Tssr134178 15 43019122 to 43019131 9 - TSS region transcription start site region 134178
Rspo2 15 43020794 to 43170826 150032 - protein coding gene R-spondin 2
Tssr134179 15 43078155 to 43078182 27 - TSS region transcription start site region 134179
Tssr134180 15 43090430 to 43090434 4 - TSS region transcription start site region 134180