Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:39002642-39222699

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26704 15 39003757 to 39006108 2351 - bidirectional promoter lncRNA gene predicted gene, 26704
Cpgi7057 15 39005761 to 39006961 1200 CpG island CpG island 7057
Tssr131131 15 39006020 to 39006048 28 + TSS region transcription start site region 131131
Fzd6 15 39006034 to 39038188 32154 + protein coding gene frizzled class receptor 6
Tssr131132 15 39006091 to 39006106 15 + TSS region transcription start site region 131132
Tssr131133 15 39006272 to 39006365 93 + TSS region transcription start site region 131133
Gm41310 15 39031826 to 39045285 13459 - lncRNA gene predicted gene, 41310
Gm49786 15 39040432 to 39041282 850 + lincRNA gene predicted gene, 49786
Gm24789 15 39040579 to 39040709 130 + snoRNA gene predicted gene, 24789
Gm7194 15 39041872 to 39066778 24906 + lncRNA gene predicted gene 7194
Gm49105 15 39061406 to 39061804 398 + pseudogene predicted gene, 49105
Cpgi7058 15 39076773 to 39077439 666 CpG island CpG island 7058
Tssr131134 15 39076885 to 39076938 53 + TSS region transcription start site region 131134
Cthrc1 15 39076932 to 39087121 10189 + protein coding gene collagen triple helix repeat containing 1
Tssr131135 15 39076964 to 39076973 9 + TSS region transcription start site region 131135
Slc25a32 15 39091231 to 39112716 21485 - protein coding gene solute carrier family 25, member 32
Cpgi7059 15 39112142 to 39113277 1135 CpG island CpG island 7059
Tssr134136 15 39112642 to 39112699 57 - TSS region transcription start site region 134136
Tssr131136 15 39112868 to 39112915 47 + TSS region transcription start site region 131136
Dcaf13 15 39112874 to 39146856 33982 + protein coding gene DDB1 and CUL4 associated factor 13
Tssr131137 15 39112923 to 39112935 12 + TSS region transcription start site region 131137
Tssr131138 15 39112942 to 39112949 7 + TSS region transcription start site region 131138
Tssr131139 15 39112951 to 39112960 9 + TSS region transcription start site region 131139
n-R5s39 15 39146380 to 39146487 107 - rRNA gene nuclear encoded rRNA 5S 39
Gm9522 15 39180511 to 39181436 925 + pseudogene predicted gene 9522
Cpgi7060 15 39196743 to 39199418 2675 CpG island CpG island 7060
Tssr131140 15 39197701 to 39197716 15 + TSS region transcription start site region 131140
Tssr131141 15 39198061 to 39198075 14 + TSS region transcription start site region 131141
Tssr131142 15 39198107 to 39198123 16 + TSS region transcription start site region 131142
Tssr131143 15 39198244 to 39198267 23 + TSS region transcription start site region 131143
Rims2 15 39198286 to 39684375 486089 + protein coding gene regulating synaptic membrane exocytosis 2
Tssr131144 15 39210034 to 39210035 1 + TSS region transcription start site region 131144