Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:32239685-32739689

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm32499 15 32156356 to 32240471 84115 + lncRNA gene predicted gene, 32499
Snhg18 15 32240568 to 32244662 4094 - lincRNA gene small nucleolar RNA host gene 18
Snord123 15 32241853 to 32241923 70 - snoRNA gene small nucleolar RNA, C/D box 123
Cpgi7001 15 32244261 to 32246310 2049 CpG island CpG island 7001
Tssr133945 15 32244413 to 32244438 25 - TSS region transcription start site region 133945
Tssr133946 15 32244443 to 32244454 11 - TSS region transcription start site region 133946
Tssr133947 15 32244567 to 32244615 48 - TSS region transcription start site region 133947
Tssr133948 15 32244621 to 32244630 9 - TSS region transcription start site region 133948
Tssr133949 15 32244632 to 32244670 38 - TSS region transcription start site region 133949
Tssr130976 15 32244801 to 32244836 35 + TSS region transcription start site region 130976
Sema5a 15 32244810 to 32696341 451531 + protein coding gene sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
Tssr130977 15 32244865 to 32244874 9 + TSS region transcription start site region 130977
Tssr130978 15 32245114 to 32245128 14 + TSS region transcription start site region 130978
Tssr133950 15 32248652 to 32248653 1 - TSS region transcription start site region 133950
Tssr130979 15 32251815 to 32251818 3 + TSS region transcription start site region 130979
Tssr130980 15 32254815 to 32254819 4 + TSS region transcription start site region 130980
Tssr130981 15 32268138 to 32268143 5 + TSS region transcription start site region 130981
Tssr130982 15 32357145 to 32357173 28 + TSS region transcription start site region 130982
Gm32562 15 32409971 to 32434440 24469 - lncRNA gene predicted gene, 32562
D15Mit137 15 32473727 to 32473866 139 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 137
Tssr130983 15 32481294 to 32481316 22 + TSS region transcription start site region 130983
Tssr130984 15 32489685 to 32489689 4 + TSS region transcription start site region 130984
D15Mit126 15 32578270 to 32578398 128 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 126
4930465K09Rik 15 32619744 to 32623505 3761 - antisense lncRNA gene RIKEN cDNA 4930465K09 gene
Tssr133951 15 32623501 to 32623508 7 - TSS region transcription start site region 133951
Bdln2 15 32645197 to 32645324 127 QTL body length 2
D15Mit54 15 32645197 to 32645324 127 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 54
Tssr130985 15 32675660 to 32675663 3 + TSS region transcription start site region 130985
Tssr130986 15 32691317 to 32691341 24 + TSS region transcription start site region 130986
Tssr130987 15 32691798 to 32691851 53 + TSS region transcription start site region 130987
Tssr130988 15 32695943 to 32695959 16 + TSS region transcription start site region 130988
Eae32 15 103517472 to 32578270 -70939202 QTL experimental allergic encephalomyelitis susceptibility 32