Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:13152955-15133227

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdh6 15 13028701 to 13173675 144974 - protein coding gene cadherin 6
Gm46513 15 13149264 to 13169977 20713 + lncRNA gene predicted gene, 46513
Tssr130754 15 13155227 to 13155238 11 + TSS region transcription start site region 130754
Tssr130755 15 13155242 to 13155247 5 + TSS region transcription start site region 130755
Cpgi6963 15 13172341 to 13172784 443 CpG island CpG island 6963
Cpgi6964 15 13173030 to 13173558 528 CpG island CpG island 6964
Tssr133803 15 13173586 to 13173602 16 - TSS region transcription start site region 133803
Tssr133804 15 13173607 to 13173644 37 - TSS region transcription start site region 133804
Tssr133805 15 13173650 to 13173658 8 - TSS region transcription start site region 133805
Tssr133806 15 13173660 to 13173706 46 - TSS region transcription start site region 133806
D15Mit53 15 13280455 to 13280591 136 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 53
Gm46517 15 13287334 to 13306975 19641 + lncRNA gene predicted gene, 46517
Gm8238 15 13418422 to 13418856 434 - pseudogene predicted gene 8238
Cpgi6965 15 13418665 to 13418887 222 CpG island CpG island 6965
Gm4940 15 13452316 to 13453109 793 + pseudogene predicted gene 4940
Tssr130756 15 13481325 to 13481328 3 + TSS region transcription start site region 130756
Gm49112 15 13481349 to 13481637 288 + pseudogene predicted gene, 49112
D15Mit179 15 13489923 to 13490069 146 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 179
D15Mit162 15 13579189 to 13579530 341 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 162
D15Mit162.1 15 13579416 to 13579558 142 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 162.1
Gm18714 15 13713972 to 13714241 269 - pseudogene predicted gene, 18714
Gm49113 15 13754781 to 13761027 6246 - lincRNA gene predicted gene, 49113
Gm49114 15 13838057 to 13840486 2429 + pseudogene predicted gene, 49114
Gm49115 15 14142955 to 14143227 272 + pseudogene predicted gene, 49115
D15Mit150.2 15 14218368 to 14218529 161 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 150.2
D15Mit150 15 14218528 to 14218650 122 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 150
Eae2 15 14218528 to 14218650 122 QTL experimental allergic encephalomyelitis susceptibility 2
Gm49116 15 14459376 to 14480986 21610 + lincRNA gene predicted gene, 49116
Gm9630 15 14465785 to 14466669 884 + pseudogene predicted gene 9630
Tssr4556 15 14645189 to 14645193 4 + TSS region transcription start site region 4556
Gm24080 15 14735053 to 14735284 231 - miRNA gene predicted gene, 24080
Tssr130757 15 15099348 to 15099352 4 + TSS region transcription start site region 130757