Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:103197255-103497263

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127 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cbx5 15 103191544 to 103239816 48272 - protein coding gene chromobox 5
Tssr136728 15 103199622 to 103199637 15 - TSS region transcription start site region 136728
Tssr136729 15 103213236 to 103213252 16 - TSS region transcription start site region 136729
Tssr136730 15 103215118 to 103215136 18 - TSS region transcription start site region 136730
Tssr136731 15 103215285 to 103215361 76 - TSS region transcription start site region 136731
Tssr136732 15 103216261 to 103216285 24 - TSS region transcription start site region 136732
A630065K11Rik 15 103231957 to 103234051 2094 unclassified gene RIKEN cDNA A630065K11 gene
Cpgi7881 15 103239221 to 103240971 1750 CpG island CpG island 7881
Tssr136733 15 103239797 to 103239806 9 - TSS region transcription start site region 136733
Tssr136734 15 103239812 to 103239888 76 - TSS region transcription start site region 136734
Tssr133517 15 103239947 to 103239993 46 + TSS region transcription start site region 133517
Tssr133518 15 103240021 to 103240070 49 + TSS region transcription start site region 133518
Tssr133519 15 103240405 to 103240429 24 + TSS region transcription start site region 133519
Hnrnpa1 15 103240432 to 103246692 6260 + protein coding gene heterogeneous nuclear ribonucleoprotein A1
Tssr133520 15 103240442 to 103240453 11 + TSS region transcription start site region 133520
Tssr136735 15 103240748 to 103240758 10 - TSS region transcription start site region 136735
Tssr133521 15 103244003 to 103244019 16 + TSS region transcription start site region 133521
Tssr4744 15 103245586 to 103245593 7 + TSS region transcription start site region 4744
Nfe2 15 103248212 to 103258403 10191 - protein coding gene nuclear factor, erythroid derived 2
Tssr136736 15 103249321 to 103249343 22 - TSS region transcription start site region 136736
Tssr136737 15 103251055 to 103251071 16 - TSS region transcription start site region 136737
Tssr136738 15 103251647 to 103251654 7 - TSS region transcription start site region 136738
Tssr136739 15 103251657 to 103251705 48 - TSS region transcription start site region 136739
Tssr136740 15 103252768 to 103252784 16 - TSS region transcription start site region 136740
Tssr136741 15 103252814 to 103252829 15 - TSS region transcription start site region 136741
Tssr133522 15 103253016 to 103253025 9 + TSS region transcription start site region 133522
Tssr136742 15 103253497 to 103253501 4 - TSS region transcription start site region 136742
Cpgi7882 15 103255051 to 103255498 447 CpG island CpG island 7882
Tssr136743 15 103255229 to 103255250 21 - TSS region transcription start site region 136743
Tssr136744 15 103255259 to 103255279 20 - TSS region transcription start site region 136744
Tssr136745 15 103255371 to 103255386 15 - TSS region transcription start site region 136745
Tssr136746 15 103255390 to 103255397 7 - TSS region transcription start site region 136746
Tssr136747 15 103255427 to 103255432 5 - TSS region transcription start site region 136747
Tssr136748 15 103255433 to 103255445 12 - TSS region transcription start site region 136748
Tssr136749 15 103260140 to 103260187 47 - TSS region transcription start site region 136749
Cpgi7883 15 103272560 to 103273149 589 CpG island CpG island 7883
Copz1 15 103272834 to 103299869 27035 + protein coding gene coatomer protein complex, subunit zeta 1
Tssr133523 15 103272888 to 103272892 4 + TSS region transcription start site region 133523
Tssr133524 15 103272893 to 103272907 14 + TSS region transcription start site region 133524
Tssr133525 15 103273805 to 103273808 3 + TSS region transcription start site region 133525
Tssr133526 15 103282047 to 103282051 4 + TSS region transcription start site region 133526
Mir148b 15 103285125 to 103285221 96 + miRNA gene microRNA 148b
Gm41406 15 103285701 to 103290490 4789 - lncRNA gene predicted gene, 41406
Tssr133527 15 103293404 to 103293406 2 + TSS region transcription start site region 133527
Tssr133528 15 103296725 to 103296759 34 + TSS region transcription start site region 133528
Tssr133529 15 103297880 to 103297900 20 + TSS region transcription start site region 133529
Tssr133530 15 103298663 to 103298669 6 + TSS region transcription start site region 133530
Tssr133531 15 103298785 to 103298808 23 + TSS region transcription start site region 133531
Tssr133532 15 103298869 to 103298888 19 + TSS region transcription start site region 133532
Tssr133533 15 103298930 to 103298972 42 + TSS region transcription start site region 133533
Tssr133534 15 103299354 to 103299388 34 + TSS region transcription start site region 133534
Cpgi7884 15 103300152 to 103300373 221 CpG island CpG island 7884
Gm49482 15 103301065 to 103309077 8012 + antisense lncRNA gene predicted gene, 49482
Cpgi7885 15 103304713 to 103305734 1021 CpG island CpG island 7885
Tssr133535 15 103305443 to 103305449 6 + TSS region transcription start site region 133535
Gpr84 15 103308235 to 103310612 2377 - protein coding gene G protein-coupled receptor 84
Tssr133536 15 103308367 to 103308406 39 + TSS region transcription start site region 133536
Cpgi7886 15 103308443 to 103309509 1066 CpG island CpG island 7886
Tssr136750 15 103310402 to 103310413 11 - TSS region transcription start site region 136750
Tssr136751 15 103310425 to 103310444 19 - TSS region transcription start site region 136751
Tssr136752 15 103310448 to 103310476 28 - TSS region transcription start site region 136752
Zfp385a 15 103313895 to 103340086 26191 - protein coding gene zinc finger protein 385A
Cpgi7887 15 103313996 to 103314547 551 CpG island CpG island 7887
Tssr136753 15 103314741 to 103314754 13 - TSS region transcription start site region 136753
Tssr136754 15 103314876 to 103314899 23 - TSS region transcription start site region 136754
Tssr136755 15 103314957 to 103314983 26 - TSS region transcription start site region 136755
Cpgi7888 15 103314971 to 103315236 265 CpG island CpG island 7888
Tssr136756 15 103314996 to 103315023 27 - TSS region transcription start site region 136756
Tssr136757 15 103315072 to 103315084 12 - TSS region transcription start site region 136757
Tssr136758 15 103315997 to 103316017 20 - TSS region transcription start site region 136758
Tssr136759 15 103316535 to 103316540 5 - TSS region transcription start site region 136759
Tssr136760 15 103318262 to 103318274 12 - TSS region transcription start site region 136760
Tssr136761 15 103319606 to 103319612 6 - TSS region transcription start site region 136761
Tssr136762 15 103319723 to 103319726 3 - TSS region transcription start site region 136762
Cpgi7889 15 103322890 to 103323833 943 CpG island CpG island 7889
Tssr136763 15 103323217 to 103323267 50 - TSS region transcription start site region 136763
Tssr136764 15 103323429 to 103323446 17 - TSS region transcription start site region 136764
Tssr136765 15 103323495 to 103323566 71 - TSS region transcription start site region 136765
Tssr136766 15 103333355 to 103333390 35 - TSS region transcription start site region 136766
Tssr136767 15 103333810 to 103333836 26 - TSS region transcription start site region 136767
Tssr136768 15 103334271 to 103334347 76 - TSS region transcription start site region 136768
Tssr133537 15 103335779 to 103335781 2 + TSS region transcription start site region 133537
Cpgi7890 15 103339795 to 103340187 392 CpG island CpG island 7890
Tssr136769 15 103340085 to 103340100 15 - TSS region transcription start site region 136769
Tssr136770 15 103340102 to 103340125 23 - TSS region transcription start site region 136770
Tssr136771 15 103340130 to 103340141 11 - TSS region transcription start site region 136771
Itga5 15 103344286 to 103366763 22477 - protein coding gene integrin alpha 5 (fibronectin receptor alpha)
Tssr136772 15 103344558 to 103344574 16 - TSS region transcription start site region 136772
Tssr136773 15 103344638 to 103344656 18 - TSS region transcription start site region 136773
Tssr136774 15 103344712 to 103344724 12 - TSS region transcription start site region 136774
Tssr136775 15 103344730 to 103344767 37 - TSS region transcription start site region 136775
Tssr136776 15 103344774 to 103344789 15 - TSS region transcription start site region 136776
Tssr136777 15 103344806 to 103344833 27 - TSS region transcription start site region 136777
Tssr136778 15 103347255 to 103347263 8 - TSS region transcription start site region 136778
Mir6963 15 103350455 to 103350525 70 - miRNA gene microRNA 6963
Tssr136779 15 103353757 to 103353784 27 - TSS region transcription start site region 136779
Cpgi7891 15 103365554 to 103366837 1283 CpG island CpG island 7891
Tssr136780 15 103366527 to 103366579 52 - TSS region transcription start site region 136780
Tssr136781 15 103366588 to 103366600 12 - TSS region transcription start site region 136781
Tssr136782 15 103366770 to 103366798 28 - TSS region transcription start site region 136782
Tssr136783 15 103376807 to 103376840 33 - TSS region transcription start site region 136783
Gm37322 15 103378071 to 103378407 336 + unclassified gene predicted gene, 37322
Tssr136784 15 103393659 to 103393671 12 - TSS region transcription start site region 136784
Gtsf1 15 103402458 to 103430446 27988 - protein coding gene gametocyte specific factor 1
Tssr136785 15 103420549 to 103420558 9 - TSS region transcription start site region 136785
Tssr136786 15 103429538 to 103429542 4 - TSS region transcription start site region 136786
Tssr136787 15 103429547 to 103429565 18 - TSS region transcription start site region 136787
Cpgi7892 15 103430200 to 103430558 358 CpG island CpG island 7892
Tssr136788 15 103430359 to 103430373 14 - TSS region transcription start site region 136788
Tssr136789 15 103430384 to 103430385 1 - TSS region transcription start site region 136789
Tssr136790 15 103430388 to 103430431 43 - TSS region transcription start site region 136790
Gtsf2 15 103438957 to 103448469 9512 - protein coding gene gametocyte specific factor 2
Gm9106 15 103445380 to 103446699 1319 - pseudogene predicted gene 9106
Tssr136791 15 103446648 to 103446668 20 - TSS region transcription start site region 136791
Tssr136792 15 103448455 to 103448464 9 - TSS region transcription start site region 136792
Tssr136793 15 103448473 to 103448492 19 - TSS region transcription start site region 136793
Tssr133538 15 103453782 to 103453860 78 + TSS region transcription start site region 133538
Nckap1l 15 103453794 to 103498810 45016 + protein coding gene NCK associated protein 1 like
Tssr133539 15 103453905 to 103453915 10 + TSS region transcription start site region 133539
Tssr133540 15 103462733 to 103462791 58 + TSS region transcription start site region 133540
Tssr133541 15 103464573 to 103464587 14 + TSS region transcription start site region 133541
Tssr133542 15 103470702 to 103470713 11 + TSS region transcription start site region 133542
D15Mit79 15 103472156 to 103472268 112 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 79
Tssr133543 15 103473534 to 103473548 14 + TSS region transcription start site region 133543
Tssr133544 15 103479117 to 103479125 8 + TSS region transcription start site region 133544
Tssr133545 15 103479129 to 103479144 15 + TSS region transcription start site region 133545
Tssr133546 15 103479180 to 103479185 5 + TSS region transcription start site region 133546