Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:102926826-102948609

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Hoxc13	15	102921131 to 102928814	7683	+	protein coding gene	homeobox C13
Cpgi7838	15	102927053 to 102927518	465		CpG island	CpG island 7838
Tssr133474	15	102928086 to 102928092	6	+	TSS region	transcription start site region 133474
Tssr4741	15	102928154 to 102928200	46	+	TSS region	transcription start site region 4741
Cpgi7839	15	102931887 to 102932042	155		CpG island	CpG island 7839
Cpgi7840	15	102934530 to 102934711	181		CpG island	CpG island 7840
Gm36820	15	102934805 to 102936471	1666	-	lncRNA gene	predicted gene, 36820
Cpgi7841	15	102934934 to 102935283	349		CpG island	CpG island 7841
Cpgi7842	15	102936662 to 102937542	880		CpG island	CpG island 7842
Tssr133475	15	102936816 to 102936834	18	+	TSS region	transcription start site region 133475
Tssr133476	15	102936842 to 102936854	12	+	TSS region	transcription start site region 133476
Hoxc12	15	102936853 to 102938517	1664	+	protein coding gene	homeobox C12
Cpgi7843	15	102938189 to 102938508	319		CpG island	CpG island 7843
Cpgi7844	15	102939447 to 102939829	382		CpG island	CpG island 7844
Cpgi7845	15	102942704 to 102943510	806		CpG island	CpG island 7845
Hotair	15	102944062 to 102947730	3668	-	lincRNA gene	HOX transcript antisense RNA (non-protein coding)
Gm27337	15	102945359 to 102945427	68	+	unclassified non-coding RNA gene	predicted gene, 27337
Gm27443	15	102947496 to 102947593	97	+	unclassified non-coding RNA gene	predicted gene, 27443