Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:95334763-95554777

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zbed3 13 95323612 to 95337841 14229 + protein coding gene zinc finger, BED type containing 3
Cpgi5970 13 95336093 to 95336686 593 CpG island CpG island 5970
Aggf1 13 95350683 to 95375352 24669 - protein coding gene angiogenic factor with G patch and FHA domains 1
Tssr123510 13 95368522 to 95368541 19 - TSS region transcription start site region 123510
Cpgi5971 13 95374430 to 95375524 1094 CpG island CpG island 5971
Tssr4143 13 95374886 to 95374898 12 - TSS region transcription start site region 4143
Tssr123511 13 95375305 to 95375321 16 - TSS region transcription start site region 123511
Tssr123512 13 95375329 to 95375369 40 - TSS region transcription start site region 123512
Gm48712 13 95421217 to 95421676 459 - pseudogene predicted gene, 48712
Crhbp 13 95431376 to 95444831 13455 - protein coding gene corticotropin releasing hormone binding protein
Cpgi5972 13 95443465 to 95444272 807 CpG island CpG island 5972
Tssr123513 13 95444700 to 95444711 11 - TSS region transcription start site region 123513
Tssr123514 13 95444763 to 95444777 14 - TSS region transcription start site region 123514
Tssr123515 13 95444827 to 95444841 14 - TSS region transcription start site region 123515
Tssr123516 13 95444886 to 95444898 12 - TSS region transcription start site region 123516
Cpgi5973 13 95468576 to 95468930 354 CpG island CpG island 5973
S100z 13 95477301 to 95478655 1354 - protein coding gene S100 calcium binding protein, zeta
F2rl1 13 95511732 to 95525227 13495 - protein coding gene coagulation factor II (thrombin) receptor-like 1
Cpgi5974 13 95524263 to 95525486 1223 CpG island CpG island 5974
Tssr123517 13 95525180 to 95525191 11 - TSS region transcription start site region 123517
Tssr123518 13 95525218 to 95525232 14 - TSS region transcription start site region 123518
Tssr123519 13 95525239 to 95525252 13 - TSS region transcription start site region 123519
Tssr123520 13 95525285 to 95525292 7 - TSS region transcription start site region 123520
Tssr123521 13 95531798 to 95531802 4 - TSS region transcription start site region 123521
Tssr120719 13 95531914 to 95531923 9 + TSS region transcription start site region 120719
Tssr123522 13 95534162 to 95534205 43 - TSS region transcription start site region 123522
Gm48730 13 95535590 to 95545200 9610 + lincRNA gene predicted gene, 48730
Gm32640 13 95544861 to 95548820 3959 - lncRNA gene predicted gene, 32640
Cpgi5975 13 95548530 to 95548727 197 CpG island CpG island 5975