Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:56142231-56262937

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr122755 13 56142676 to 56142690 14 - TSS region transcription start site region 122755
Tssr120001 13 56144316 to 56144327 11 + TSS region transcription start site region 120001
Tssr120002 13 56150379 to 56150383 4 + TSS region transcription start site region 120002
Cpgi5696 13 56151627 to 56151835 208 CpG island CpG island 5696
Tssr120003 13 56152059 to 56152100 41 + TSS region transcription start site region 120003
Tssr122756 13 56152898 to 56152909 11 - TSS region transcription start site region 122756
Tssr120004 13 56159243 to 56159258 15 + TSS region transcription start site region 120004
Tssr120005 13 56159272 to 56159280 8 + TSS region transcription start site region 120005
Tssr120006 13 56163114 to 56163135 21 + TSS region transcription start site region 120006
Tssr120007 13 56166523 to 56166526 3 + TSS region transcription start site region 120007
Gm31657 13 56166600 to 56193544 26944 + lncRNA gene predicted gene, 31657
Gm25148 13 56167600 to 56167722 122 + snoRNA gene predicted gene, 25148
Tssr122757 13 56173157 to 56173161 4 - TSS region transcription start site region 122757
Tssr120008 13 56173464 to 56173475 11 + TSS region transcription start site region 120008
Tifab 13 56173704 to 56178885 5181 - protein coding gene TRAF-interacting protein with forkhead-associated domain, family member B
Tssr122758 13 56176010 to 56176035 25 - TSS region transcription start site region 122758
Tssr122759 13 56176264 to 56176281 17 - TSS region transcription start site region 122759
Tssr122760 13 56176364 to 56176386 22 - TSS region transcription start site region 122760
Tssr122761 13 56178582 to 56178593 11 - TSS region transcription start site region 122761
Tssr122762 13 56178601 to 56178637 36 - TSS region transcription start site region 122762
Tssr122763 13 56178641 to 56178648 7 - TSS region transcription start site region 122763
Tssr122764 13 56178651 to 56178721 70 - TSS region transcription start site region 122764
Tssr122765 13 56178797 to 56178811 14 - TSS region transcription start site region 122765
Tssr122766 13 56178822 to 56178833 11 - TSS region transcription start site region 122766
Tssr122767 13 56178864 to 56178897 33 - TSS region transcription start site region 122767
Tssr122768 13 56178931 to 56178936 5 - TSS region transcription start site region 122768
Tssr122769 13 56178987 to 56179001 14 - TSS region transcription start site region 122769
Tssr122770 13 56179045 to 56179056 11 - TSS region transcription start site region 122770
Tssr120009 13 56181787 to 56181810 23 + TSS region transcription start site region 120009
Tssr122771 13 56183767 to 56183780 13 - TSS region transcription start site region 122771
Gm47104 13 56202231 to 56202937 706 - pseudogene predicted gene, 47104
Cpgi5697 13 56208952 to 56209156 204 CpG island CpG island 5697
Cpgi5698 13 56221160 to 56222712 1552 CpG island CpG island 5698
4930550C17Rik 13 56222224 to 56243940 21716 - lincRNA gene RIKEN cDNA 4930550C17 gene
Neurog1 13 56250492 to 56252163 1671 - protein coding gene neurogenin 1
Cpgi5699 13 56251165 to 56252776 1611 CpG island CpG island 5699
Tssr122772 13 56252175 to 56252181 6 - TSS region transcription start site region 122772
Cpgi5700 13 56258349 to 56259702 1353 CpG island CpG island 5700