MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:55937384-56120234

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr119995	13	55957715 to 55957725	10	+	TSS region	transcription start site region 119995
Gm47071	13	56002265 to 56084849	82584	+	antisense lncRNA gene	predicted gene, 47071
Tssr119996	13	56006028 to 56006037	9	+	TSS region	transcription start site region 119996
Gm47072	13	56027384 to 56030234	2850	-	pseudogene	predicted gene, 47072
Tssr119997	13	56067541 to 56067548	7	+	TSS region	transcription start site region 119997
Tssr119998	13	56073622 to 56073625	3	+	TSS region	transcription start site region 119998
H2afy	13	56073622 to 56135626	62004	-	protein coding gene	H2A histone family, member Y
Tssr122732	13	56074045 to 56074059	14	-	TSS region	transcription start site region 122732
Tssr122733	13	56088564 to 56088569	5	-	TSS region	transcription start site region 122733
Tssr122734	13	56088665 to 56088668	3	-	TSS region	transcription start site region 122734
Tssr122735	13	56089156 to 56089192	36	-	TSS region	transcription start site region 122735
Tssr122736	13	56096174 to 56096189	15	-	TSS region	transcription start site region 122736
Tssr119999	13	56104318 to 56104335	17	+	TSS region	transcription start site region 119999
Cpgi5693	13	56104424 to 56104588	164		CpG island	CpG island 5693
Tssr122737	13	56104459 to 56104472	13	-	TSS region	transcription start site region 122737
Tssr120000	13	56104933 to 56104949	16	+	TSS region	transcription start site region 120000
Gm31485	13	56110546 to 56116812	6266	-	lncRNA gene	predicted gene, 31485
Cpgi5694	13	56113152 to 56113335	183		CpG island	CpG island 5694