Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 13:55109856-55210371

Filter by:
22 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp346 13 55105311 to 55134825 29514 + protein coding gene zinc finger protein 346
4432414F05Rik 13 55109794 to 55112339 2545 lncRNA gene RIKEN cDNA 4432414F05 gene
A130082J08Rik 13 55124747 to 55126630 1883 lncRNA gene RIKEN cDNA A130082J08 gene
Gm46415 13 55127839 to 55128183 344 - pseudogene predicted gene, 46415
Gm17617 13 55132962 to 55133548 586 - protein coding gene predicted gene, 17617
Cpgi5658 13 55152438 to 55153437 999 CpG island CpG island 5658
Tssr119914 13 55152801 to 55152833 32 + TSS region transcription start site region 119914
Fgfr4 13 55152818 to 55168759 15941 + protein coding gene fibroblast growth factor receptor 4
Cpgi5659 13 55159856 to 55160371 515 CpG island CpG island 5659
Cpgi5660 13 55161301 to 55161805 504 CpG island CpG island 5660
Cpgi5661 13 55171912 to 55172106 194 CpG island CpG island 5661
Tssr122677 13 55182558 to 55182565 7 - TSS region transcription start site region 122677
3930401B19Rik 13 55184770 to 55186646 1876 lncRNA gene RIKEN cDNA 3930401B19 gene
Cpgi5662 13 55190076 to 55190667 591 CpG island CpG island 5662
Tssr122678 13 55190186 to 55190236 50 - TSS region transcription start site region 122678
Tssr119915 13 55190417 to 55190440 23 + TSS region transcription start site region 119915
Tssr119916 13 55190450 to 55190465 15 + TSS region transcription start site region 119916
Cpgi5663 13 55209719 to 55213014 3295 CpG island CpG island 5663
Tssr119917 13 55209776 to 55209788 12 + TSS region transcription start site region 119917
Nsd1 13 55209782 to 55318325 108543 + protein coding gene nuclear receptor-binding SET-domain protein 1
Tssr119918 13 55209805 to 55209812 7 + TSS region transcription start site region 119918
Tssr119919 13 55210315 to 55210357 42 + TSS region transcription start site region 119919