Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:31809579-32348740

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Foxc1 13 31806646 to 31810635 3989 + protein coding gene forkhead box C1
D13Cwr24 13 31809617 to 31809840 223 DNA segment DNA segment, Chr. 13, Case Western Reserve 24
Cpgi5421 13 31810564 to 31812079 1515 CpG island CpG island 5421
4930548F15Rik 13 31811161 to 31812475 1314 unclassified gene RIKEN cDNA 4930548F15 gene
D13Cwr23 13 31817332 to 31817640 308 DNA segment DNA segment, Chr. 13, Case Western Reserve 23
Gmds 13 31819583 to 32338725 519142 - protein coding gene GDP-mannose 4, 6-dehydratase
Tssr119147 13 31820063 to 31820068 5 + TSS region transcription start site region 119147
Tssr121992 13 31820587 to 31820620 33 - TSS region transcription start site region 121992
Gm48883 13 31832905 to 31834736 1831 - unclassified gene predicted gene, 48883
D13Cwr22 13 31856149 to 31856298 149 DNA segment DNA segment, Chr. 13, Case Western Reserve 22
D13Cwr21 13 31873413 to 31873664 251 DNA segment DNA segment, Chr. 13, Case Western Reserve 21
D13Mit294 13 31874204 to 31874305 101 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology 294
Tssr119148 13 31884187 to 31884200 13 + TSS region transcription start site region 119148
Gm11380 13 31884225 to 31885224 999 + pseudogene predicted gene 11380
D13Cwr20 13 31891937 to 31892154 217 DNA segment DNA segment, Chr. 13, Case Western Reserve 20
Tssr119149 13 31899623 to 31899632 9 + TSS region transcription start site region 119149
D13Cwr19 13 31911116 to 31911243 127 DNA segment DNA segment, Chr. 13, Case Western Reserve 19
D13Cwr18 13 31912182 to 31912436 254 DNA segment DNA segment, Chr. 13, Case Western Reserve 18
D13Cwr17 13 31919508 to 31919662 154 DNA segment DNA segment, Chr. 13, Case Western Reserve 17
D13Cwr16 13 31958217 to 31958366 149 DNA segment DNA segment, Chr. 13, Case Western Reserve 16
Gm35732 13 31971086 to 31972329 1243 + antisense lncRNA gene predicted gene, 35732
9130221L21Rik 13 31976647 to 31979257 2610 unclassified gene RIKEN cDNA 9130221L21 gene
Tssr121993 13 31984823 to 31984827 4 - TSS region transcription start site region 121993
Gm35672 13 32007295 to 32092787 85492 + lncRNA gene predicted gene, 35672
D13Cwr15 13 32013512 to 32013704 192 DNA segment DNA segment, Chr. 13, Case Western Reserve 15
D13Cwr12 13 32067534 to 32067711 177 DNA segment DNA segment, Chr. 13, Case Western Reserve 12
Gm48885 13 32095279 to 32099175 3896 - unclassified gene predicted gene, 48885
Tssr121994 13 32214100 to 32214127 27 - TSS region transcription start site region 121994
Tssr4034 13 32214147 to 32214152 5 - TSS region transcription start site region 4034
Cpgi5422 13 32337948 to 32338955 1007 CpG island CpG island 5422
Tssr121995 13 32338500 to 32338542 42 - TSS region transcription start site region 121995
Tssr121996 13 32338554 to 32338564 10 - TSS region transcription start site region 121996
Tssr121997 13 32338565 to 32338660 95 - TSS region transcription start site region 121997
A730091E23Rik 13 32338819 to 32342643 3824 + unclassified gene RIKEN cDNA A730091E23 gene