MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:30939873-31219876

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Exoc2	13	30813919 to 30974093	160174	-	protein coding gene	exocyst complex component 2
Hus1b	13	30946576 to 30947761	1185	-	protein coding gene	HUS1 checkpoint clamp component B
Cpgi5410	13	30947302 to 30947511	209		CpG island	CpG island 5410
Tssr4032	13	30948934 to 30948950	16	+	TSS region	transcription start site region 4032
Tssr121975	13	30950314 to 30950325	11	-	TSS region	transcription start site region 121975
Cpgi5411	13	30973674 to 30974446	772		CpG island	CpG island 5411
Tssr121976	13	30974023 to 30974047	24	-	TSS region	transcription start site region 121976
Tssr121977	13	30974048 to 30974098	50	-	TSS region	transcription start site region 121977
Tssr121978	13	30974118 to 30974127	9	-	TSS region	transcription start site region 121978
Gm5447	13	30974204 to 30975976	1772	+	protein coding gene	predicted gene 5447
Cpgi5412	13	30985511 to 30985870	359		CpG island	CpG island 5412
Gm11371	13	31009177 to 31010362	1185	+	pseudogene	predicted gene 11371
Gm48662	13	31072730 to 31077845	5115	-	lincRNA gene	predicted gene, 48662
Tssr121979	13	31077452 to 31077464	12	-	TSS region	transcription start site region 121979
Tssr121980	13	31079873 to 31079876	3	-	TSS region	transcription start site region 121980
Gm35302	13	31080897 to 31084403	3506	+	lncRNA gene	predicted gene, 35302
Tssr119124	13	31191917 to 31191929	12	+	TSS region	transcription start site region 119124
Gm11372	13	31199086 to 31199655	569	+	pseudogene	predicted gene 11372
4930401O12Rik	13	31213410 to 31241086	27676	-	lincRNA gene	RIKEN cDNA 4930401O12 gene