Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:30181339-30581364

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mboat1 13 30136489 to 30246717 110228 + protein coding gene membrane bound O-acyltransferase domain containing 1
Gm11366 13 30181716 to 30182144 428 + pseudogene predicted gene 11366
Gm40863 13 30231667 to 30235651 3984 - lncRNA gene predicted gene, 40863
Tssr121948 13 30235190 to 30235204 14 - TSS region transcription start site region 121948
Tssr119083 13 30245620 to 30245625 5 + TSS region transcription start site region 119083
Tssr119084 13 30331828 to 30331861 33 + TSS region transcription start site region 119084
Cpgi5404 13 30336375 to 30336817 442 CpG island CpG island 5404
Tssr119085 13 30336381 to 30336415 34 + TSS region transcription start site region 119085
Tssr119086 13 30336433 to 30336450 17 + TSS region transcription start site region 119086
Agtr1a 13 30336441 to 30382867 46426 + protein coding gene angiotensin II receptor, type 1a
Tssr119087 13 30345528 to 30345558 30 + TSS region transcription start site region 119087
Gm48161 13 30370359 to 30377183 6824 + sense intronic lncRNA gene predicted gene, 48161
Cpgi5405 13 30381142 to 30381531 389 CpG island CpG island 5405
Tssr119088 13 30381339 to 30381364 25 + TSS region transcription start site region 119088
Gm11369 13 30399617 to 30399934 317 - pseudogene predicted gene 11369
D13Dcr7 13 30519830 to 30519929 99 DNA segment DNA Segment, Chr 13, Derry C. Roopenian 7
Tssr121949 13 30532535 to 30532566 31 - TSS region transcription start site region 121949
Uqcrfs1 13 30540312 to 30545316 5004 - protein coding gene ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
Cpgi5406 13 30544754 to 30545586 832 CpG island CpG island 5406
Tssr121950 13 30545254 to 30545346 92 - TSS region transcription start site region 121950
Tssr121951 13 30551358 to 30551381 23 - TSS region transcription start site region 121951
Tssr121952 13 30551383 to 30551388 5 - TSS region transcription start site region 121952
Tssr121953 13 30551727 to 30551731 4 - TSS region transcription start site region 121953